Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq629 86.0 4e-12 seq5 84.2 1e-11 >seq629 Length=7623 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || ||||| | || | ||||| || | || ||||| || || || |||||||||| Sbjct 3963 CCTCCTCTAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCG 3904 Query 33203 AAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGT 33262 | | || | ||| |||| ||||| || || || ||||| |||||||| | ||| Sbjct 3903 AGAGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGA 3844 Query 33263 ATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACG 33322 |||||||| || || ||| ||| || || | | || ||||| | | || Sbjct 3843 ATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCAGAAGACTCGACC 3784 Query 33323 TCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||||||| || || || || || || || || |||||||||||||| Sbjct 3783 TCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 3737 >seq5 Length=69586 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||| || | || ||||| || || || ||||| || | | || | ||| ||| Sbjct 14163 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCC 14222 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 | ||||| || || || |||||||||||||||| ||| |||||||| || || Sbjct 14223 AGCTGCTTGCCGGCGAAGATCAAACGTTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGG 14282 Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340 ||| ||| || || | | || ||||| | | || || ||||| || || ||| Sbjct 14283 ATCTTCTGCTTCACGTTCTCGATGGTGTCCGAAGACTCCACTTCGAGAGTGATGGTCTTT 14342 Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||||| || || || |||||||||||||| Sbjct 14343 CCCGTGAGGGTCTTGACGAAAATTTGCAT 14371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318720492885702