Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1590 104 2e-17 seq6154 95.1 1e-14 seq14642 93.3 4e-14 seq294 93.3 4e-14 seq5 89.7 5e-13 seq11709 87.8 2e-12 seq4150 86.0 6e-12 seq629 86.0 6e-12 >seq1590 Length=2191 Score = 104 bits (114), Expect = 2e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 26761 CAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAG 26820 || ||| ||||||| | || | || || | || ||||| | || ||| ||||| | | Sbjct 349 CACACACAATGCAAATTTTCGAGAAGACCCTCACGGGAAAGACCATTACCCTCGAAGTGG 290 Query 26821 AATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTC 26880 | ||| ||||||||||||| | ||||| || ||||| ||||| ||||| || |||| Sbjct 289 AGTCATCCGACACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTC 230 Query 26881 CCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG 26940 |||| || ||| | || || | || ||| || |||||||| || | | | | | || Sbjct 229 CCGACCAGCAACGCCTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCTTGGCCG 170 Query 26941 ACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||| ||||| || || || || || |||| |||| || Sbjct 169 ACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTTCT 130 >seq6154 Length=1076 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 26761 CAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAG 26820 |||||| ||||||| | || || || || | |||||||| | |||||| | || | | Sbjct 705 CAAACACAATGCAAATTTTCGTCAAGACCCTCACTGGAAAGACCATCACCCTGGAGGTGG 764 Query 26821 AATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTC 26880 | || |||||||||||| | || || || ||||| ||||| ||||| || || | Sbjct 765 AGTCCTCGGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCCC 824 Query 26881 CCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG 26940 ||||||| ||| | | || | || |||||| || || || || | | | | | | || Sbjct 825 CCGATCAGCAACGCTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACCCTGGCCG 884 Query 26941 ACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||| ||||| || || || || || |||| |||| || Sbjct 885 ACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTTCT 924 >seq14642 Length=99085 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 || ||||||| | || || || || | || ||||| | |||||| |||| | || Sbjct 59547 CACAATGCAAATCTTCGTCAAGACCCTCACGGGAAAGACCATCACCCTCGAGGTGGAGAG 59488 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 ||||||||||||| | ||||| |||||||| ||||| ||||| || || || || Sbjct 59487 CTCCGACACCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAAGGCATTCCCCCTGA 59428 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || | ||||| | | |||||| || || || || | | | | | |||||| Sbjct 59427 CCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGTACCTTGGCCGACTA 59368 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || || || || ||| |||| ||||||| | || || ||||| Sbjct 59367 CAACATCCAGAAGGAGTCCACTCTCCACTTGGTCCTTCGTCTGAGGGGAGG 59317 >seq294 Length=52215 Score = 93.3 bits (102), Expect = 4e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||||| | || || || ||||| ||||| ||||| || |||||||| || Sbjct 28897 CGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCA 28838 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | || || | || |||||| ||||| || || | | | | | | |||||| || Sbjct 28837 GCAACGCCTGATCTTCGCCGGCAAGCAACTGGAGGACGGTCGCACCCTGGCCGACTACAA 28778 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996 ||| || || || ||||| |||| ||||||| | ||| | || ||| Sbjct 28777 CATCCAGAAGGAGTCTACCCTCCACTTGGTCCTTCGTCTTCGTGGCGGA 28729 >seq5 Length=69586 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823 ||| ||||||| | || || || || | || ||||| | ||||| ||||| | || | Sbjct 14376 ACACAATGCAAATTTTCGTCAAGACCCTCACGGGAAAGACCATCACTCTCGAAGTGGAGT 14317 Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883 | |||||||||||| | || || || ||||| ||||| ||||| || || || | Sbjct 14316 CTTCGGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCCCCGG 14257 Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACT 26943 | || ||| | | || | || |||||| || || || || | | | | || ||||| Sbjct 14256 ACCAGCAACGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACT 14197 Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | ||||| || || || |||||| | || ||||||| Sbjct 14196 ACAACATCCAGAAGGAGTCTACTCTTCACTTGGTCCT 14160 >seq11709 Length=580 Score = 87.8 bits (96), Expect = 2e-12 Identities = 112/153 (73%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||||||||||| | ||||| |||||||| ||||| || || || || ||||| || Sbjct 382 CGACACCATCGAGAACGTCAAGCAAAAGATCCAAGACAAGGAGGGTATTCC-CCCGACCA 324 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | || || | || ||||||||| || || || | | | | | | |||||| || Sbjct 323 GCAACGCCTGATCTTCGCCGGCAAACAGCTGGAGGACGGTCGCACCCTGGCCGACTACAA 264 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||| || || || ||||| |||| ||||||| Sbjct 263 CATCCAGAAGGAGTCTACCCTCCACTTGGTCCT 231 >seq4150 Length=1450 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823 ||| ||||||| | || || || || | ||||| || | |||||| | || | || | Sbjct 220 ACACAATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGT 161 Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883 | |||||||||||| | || || || ||||| ||||| || || || || |||| Sbjct 160 CTTCGGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCG 101 Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACT 26943 |||| ||| | | || | || ||||| || || || || | | | | | | ||||| Sbjct 100 ATCAGCAACGCTTGATCTTCGCGGGCAAGCAGCTGGAGGACGGTCGTACCCTGGCCGACT 41 Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | ||||| || || || ||||| |||| ||||||| Sbjct 40 ACAACATCCAGAAGGAGTCTACCCTCCACTTGGTCCT 4 >seq629 Length=7623 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 26761 CAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAG 26820 |||||| ||||||| | || || || || | ||||| || | ||||| | || | | Sbjct 3729 CAAACACAATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTCG 3788 Query 26821 AATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTC 26880 | || |||||||||||| | || || || ||||| ||||| ||||| || || | Sbjct 3789 AGTCTTCTGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCCC 3848 Query 26881 CCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG 26940 |||| || || | | || | || |||||| || || || || | | | | || | Sbjct 3849 CCGACCAGCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACTCTCGCTG 3908 Query 26941 ACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 | || ||||| || || || || || |||| ||||||| | ||||||||||| Sbjct 3909 ATTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGTCTTAGAGGAGG 3963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478574451767280