Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3 295 2e-74 >seq3 Length=147229 Score = 295 bits (326), Expect = 2e-74 Identities = 600/882 (68%), Gaps = 8/882 (1%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 || ||||| | || || || ||| | ||||| ||||| || || |||||| || Sbjct 144336 ATCGTTGAGAGGCCTCAACACATGATCATGCGAGTTGCCATCGGCATCCATATGGGAGAC 144277 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCA 363559 ||| ||| || ||||| || || || || | || | | | || || || ||||||| Sbjct 144276 ATTGCTGCTGCCATTGAGACCTACAATCTCAT--GTCCAACCTCTACTTTACTCACGCCA 144219 Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619 | || || | | ||| || || || || || | ||||| |||||| | || | Sbjct 144218 CCCCCACTCTCTTCAACGCCGGCACAGAGCGGCCGCAACTCTCTTCCTGCTTTTTGCTCA 144159 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 |||| ||| || ||||||||| |||| ||||| || ||| | || || | || | Sbjct 144158 CGATGAGGGAGGACAGCATCGAGGGCATCTACGACACCCTAAAGCAATGCGCCTTGATCT 144099 Query 363680 CCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACAGAACAGTTAC 363738 ||||| || || || || || | | || | |||| | ||||| | |||| ||| Sbjct 144098 CCAAGGCCGCTGGTGGCATCGGCCTCAGCG-TACACACAATCCGTGCCTCGCACAGCTAC 144040 Query 363739 ATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798 || || || || || ||||| || || | || |||||||| || ||| || | Sbjct 144039 ATCCGTGGAACTAATGGCACGTCGAACGGTCTCATCCCGATGCTTCGCGTCTTTAACGAC 143980 Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 ||||| || ||||||||||| || ||||| || |||||||| || |||||| | || | Sbjct 143979 ACTGCCAGATACGTCGACCAAGGAGGAGGCAAACGCAAAGGAGCTTTTGCTGTCTACTTG 143920 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918 ||||| || || || |||| |||||||| ||||| ||| ||| || || ||| Sbjct 143919 GAGCCATGGCACGCGGACGTTTTCGAGTTTCTGGAGCTGAAGAAGAACCACGGCAAGGAG 143860 Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978 || |||| || | || || || || || || |||||| | |||| || |||||||| Sbjct 143859 GAGCTGCGCGCCAGAGACCTCTTTTACGCGCTCTGGGTTCCGGACCTATTCATGAAGCGA 143800 Query 363979 GTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037 |||||| ||| | || | ||||| || ||||| || ||||| ||| || | | || Sbjct 143799 GTGGAGAGCA-ATCAGGAGTGGTCCCTGTTTTGTCCCAACGAAGCTCCCGGCTTGGCTGA 143741 Query 364038 TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCG 364097 ||| ||||| || || | || || || ||| || ||| |||||| || | Sbjct 143740 TGTCTGGGGAGAGGAGTTTGAGGCGCTCTACACTCGATACGAACAGGAGGGCCGAGCCAG 143681 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 | || || || || |||| ||||| |||||| |||| ||||| ||||| || Sbjct 143680 GAGGAGCGTTAAGGCCCAAGAGCTCTGGTTCGCCATCCTGGAGAGCCAGATAGAGACCGG 143621 Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 || ||||||||| | ||||| || ||||||||||||||||||||||| ||| |||| || Sbjct 143620 CACGCCCTATATGCTATACAAGGACTCGTGCAACCGCAAGTCCAACCAACAGAACCTCGG 143561 Query 364218 TACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 || |||| |||||||| || || ||||| || || |||||| | ||||| Sbjct 143560 CACCATTCGTTCAAGCAACCTTTGCACGGAGATCATGGAGTACACCTCCAAGGACGAAGT 143501 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 || || || ||||| || || |||| ||||| |||||| Sbjct 143500 GGCTGTGTGCAACCTCGCTTCTCTCGCTCTTCCCAAGTTTGT 143459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303108138194618