Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq14642 95.1 1e-14 seq1590 91.5 1e-13 seq5 86.0 5e-12 seq5330 82.4 6e-11 seq294 82.4 6e-11 >seq14642 Length=99085 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| || ||||| || ||||||||||| ||||| ||| |||| |||| | Sbjct 59544 AATGCAAATCTTCGTCAAGACCCTCACGGGAAAGACCATCACCCTCGAGGTGGAGAGCTC 59485 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | | | || || ||||| || || || |||||| | ||| ||| || Sbjct 59484 CGACACCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 59425 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | || || | ||| ||||| || | || || | | ||| ||||||| || || Sbjct 59424 GCAGCGCCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGTACCTTGGCCGACTACAA 59365 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 ||| || || ||||| ||| | || |||| Sbjct 59364 CATCCAGAAGGAGTCCACTCTCCACTTGGT 59335 >seq1590 Length=2191 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| | || || ||||||||||| ||||||||| ||||| |||||| Sbjct 342 AATGCAAATTTTCGAGAAGACCCTCACGGGAAAGACCATTACCCTCGAAGTGGAGTCATC 283 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | | | || || || || || || || |||||| |||| || || Sbjct 282 CGACACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCA 223 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | || || | || || || ||| | || || | | ||| ||||||| || || Sbjct 222 GCAACGCCTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCTTGGCCGACTACAA 163 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||| || || ||||| || Sbjct 162 CATCCAGAAGGAGTCCAC 145 >seq5 Length=69586 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| ||||| || ||||||||||| ||||| || ||||| |||||| Sbjct 14372 AATGCAAATTTTCGTCAAGACCCTCACGGGAAAGACCATCACTCTCGAAGTGGAGTCTTC 14313 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | | || || || || || || || |||||| | ||| || || Sbjct 14312 GGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCA 14253 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | || | || ||||| || | || || | | ||| | ||||| || || Sbjct 14252 GCAACGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTACAA 14193 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 ||| || || ||||||||| | || |||| Sbjct 14192 CATCCAGAAGGAGTCTACTCTTCACTTGGT 14163 >seq5330 Length=1214 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||||||||||| ||||| || ||||||||||| ||||| || | || ||||| Sbjct 870 AAAATGCAAATTTTCGTCAAGACCCTCACGGGAAAGACCATCACTCTTGAGGTCGAGTCT 811 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 ||| ||| | | | || || ||||| || || || || ||| |||| || Sbjct 810 TCCGATACTATCGAGAACGTGAAGCAAAAGATCCAAGACAAGGAGGGCATCCCTCCCAAT 751 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 |||||| |||| || | |||||||| || | || || | | | || | || ||||| Sbjct 750 CAGCAACGACTGATCTCCGCGGGCAAGCAGCTGGAGGACGGCCACACTCTAGCTGATTAC 691 Query 115463 AACATTCAAAAAGAGTCTAC 115482 || || | || |||||||| Sbjct 690 AATATCCTGAAGGAGTCTAC 671 >seq294 Length=52215 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| ||||| || ||||||||||| ||||| ||| ||||| ||||||| Sbjct 29185 AATGCAAATTTTCGTCAAGACCCTCACGGGAAAGACCATCACCCTCGAAGTGGAGTCCTC 29126 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| | | | || || || || || || || || || | ||| ||| || Sbjct 29125 GGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCA 29066 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | || | || ||||| ||| | || || | | ||| | || ||||| || Sbjct 29065 GCAGCGCTTGATCTTCGCCGGCAAGCAACTGGAGGACGGCCGTACCCTCGCTGATTACAA 29006 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||||| || ||||| || Sbjct 29005 TATTCAGAAGGAGTCCAC 28988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425267802147880