Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq7184 131 1e-25 seq14686 127 1e-24 seq104 120 2e-22 seq14337 109 4e-19 seq3021 100 2e-16 seq5612 98.7 7e-16 seq1075 86.0 4e-12 seq294 86.0 4e-12 >seq7184 Length=931 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || | | |||||||||||| || |||||| |||||| || || ||||| || | Sbjct 370 TACCTCCACGGAGACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGG 429 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| ||| | || || | || || ||||| || || ||||| || || |||| || Sbjct 430 CCAAGGTACGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGG 489 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||| || |||||| ||||| |||||||| |||| || || || || || | Sbjct 490 GAATGCCCTCCTTGTCCTGGATTTTCTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCA 549 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || || ||||| || || || |||||||| || ||||| ||||||||| Sbjct 550 CCTCCAAGGTAATGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCATG 599 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || |||| |||||||||||| || |||||| |||||| || || ||||| || | | Sbjct 600 CCTCCCCTCAGACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 659 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || || |||| || | || || || ||||| || ||||| || ||||||| ||| Sbjct 660 AAGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGAGGG 719 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||| |||||| || |||||||| ||||| | | ||| || ||| ||| Sbjct 720 ATGCCTTCCTTGTCCTGGATCTTTTGCTTGACATTTTCAATAGTGTCAGAGGATTCCACT 779 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || || || || || | ||| || ||||| |||||||| Sbjct 780 TCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 826 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| || |||||| ||||||||| || |||||||||| ||| || |||| || Sbjct 162 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCAGCCAAGGTGCGGCCGTCCTCC 221 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | || || ||||| || || || || || || |||| ||| | ||| || |||||| Sbjct 222 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 281 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || ||||||||||| |||| || || || || || ||||| | || || || || Sbjct 282 ATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTGATGGTCTTT 341 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | || || ||||| |||||||| Sbjct 342 CCGGTAAGAGTCTTGACGAAGATCTGCAT 370 >seq14686 Length=12525 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct 521 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTGAGTAGGGACAGTGGGAATCTCGT 580 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 581 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 615 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 2889 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 2948 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 2949 GCCTGTATTTAGCCTTA 2965 >seq104 Length=38954 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | || ||| | ||||| || |||||| ||||||||| || ||||| || | Sbjct 26197 TACCACCGCGCAGACGGAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGG 26256 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| ||| |||| || | || || ||||| || || ||||| || || || | || Sbjct 26257 CCAAGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGG 26316 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| |||||| || ||||||||||| |||| || || || || || | Sbjct 26317 GAATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCA 26376 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || || ||||| || | ||| || ||||| || ||||| Sbjct 26377 CCTCCAAAGTGATTGTCTTACCAGTGAGGGTCTTGACGAAGATTTGCAT 26425 >seq14337 Length=503 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| ||||| ||| ||||| ||| || ||||| || | ||| ||| |||| | Sbjct 216 ACCAAGTGAAGGGTGGACTCCTGTTGGATGTTGTAGTCGGCCAAGGTACGACCGTCCGCA 275 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | || || ||||| || || |||||||| || || | ||||| || || |||||| Sbjct 276 AGCTGCTTGCCGGCGAAGATGAGGCGTTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGG 335 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || ||||||||||| |||| || || || || || || || |||||||| || Sbjct 336 ATCTTTTGCTTCACGTTCTCGATGGTGTCCGAGGACTCCACCTCCAAGGTAATAGTCTTG 395 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || ||||||| || ||||| ||||||||| Sbjct 396 CCAGTCAAGGACTTAACGAAGATCTGCATG 425 >seq3021 Length=1716 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162 ||||||||||| || || ||| |||||| || || ||||| || | ||| || || Sbjct 1 CGCAACACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCG 60 Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222 || || | || || || || || || || || || ||||||| ||||| || || || Sbjct 61 TCCTCCAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGATCGGGGGGGATTCCCTCCTTA 120 Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATA 38282 ||| || |||||||||||||||| || || || || || || | || ||| Sbjct 121 TCCTGGATCTTTTGCTTCACATTCTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATA 180 Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || | || |||||||| |||||||| Sbjct 181 GTTTTGCCTGTGAGCGTCTTCACGAAGATCTGCAT 215 >seq5612 Length=1165 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| || || ||| |||||| || || ||||| || | ||| ||| |||| || Sbjct 807 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGACCGTCCTCC 866 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | || || || || || || | ||| || || |||| |||| ||||| ||||| Sbjct 867 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATACCTTCCTTGTCTTGG 926 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || ||||||||||| |||| || |||||| | || || || | || || ||||| Sbjct 927 ATCTTTTGCTTCACGTTCTCGATAGTATCAGAAGACTCGACCTCAAGAGTGATGGTTTTG 986 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || |||| ||| || ||||| |||||||| Sbjct 987 CCAGTCAGGGTCTTGACGAAGATCTGCAT 1015 >seq1075 Length=2391 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| || || ||| |||||| || || ||||| || | || || |||| || Sbjct 1657 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCC 1598 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | ||| || || || || || | || || || |||| |||| || || ||||| Sbjct 1597 AGTTGCTTACCCGCGAAGATCAATCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCTTGG 1538 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || ||||||||||| |||| | |||||| | || || || | || || ||||| Sbjct 1537 ATCTTTTGCTTCACGTTCTCAATAGTATCAGAAGACTCGACCTCAAGAGTGATGGTTTTG 1478 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || |||||||| || ||||| ||||||||| Sbjct 1477 CCAGTCAAGGTCTTAACGAAGATCTGCATG 1448 >seq294 Length=52215 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || |||| ||| | || | || || ||| |||||| |||||||||||||||| Sbjct 28958 CCTCCCCTCAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGAATATTGTAATCAGCG 29017 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | ||| |||| || | ||| || ||||| || || | ||| || || || | ||| Sbjct 29018 AGGGTACGGCCGTCCTCCAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGGA 29077 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| || || |||||||| |||| || || || || ||| Sbjct 29078 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGGACTCCACT 29137 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || ||||| | ||| || ||||| || ||||| Sbjct 29138 TCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAAATTTGCAT 29184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334887196197869