Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq14517 104 5e-17 seq14540 102 2e-16 seq6892 102 2e-16 seq5187 102 2e-16 seq4521 102 2e-16 seq4429 102 2e-16 seq70 102 2e-16 seq4 102 2e-16 seq5480 100 6e-16 seq149 100 6e-16 seq14654 96.9 7e-15 seq768 96.9 7e-15 seq213 96.9 7e-15 seq132 96.9 7e-15 seq60 96.9 7e-15 seq17 96.9 7e-15 seq5388 91.5 3e-13 seq63 91.5 3e-13 seq2 91.5 3e-13 >seq14517 Length=79135 Score = 104 bits (114), Expect = 5e-17 Identities = 63/67 (94%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 ||||| || |||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 9074 TAGCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGA 9133 Query 142562 GCCCCAC 142568 ||||||| Sbjct 9134 GCCCCAC 9140 >seq14540 Length=27423 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 17065 AGCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 17124 Query 142563 CCCCAC 142568 |||||| Sbjct 17125 CCCCAC 17130 >seq6892 Length=969 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 864 AGCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 805 Query 142563 CCCCAC 142568 |||||| Sbjct 804 CCCCAC 799 >seq5187 Length=1243 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 1148 AGCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 1089 Query 142563 CCCCAC 142568 |||||| Sbjct 1088 CCCCAC 1083 >seq4521 Length=1378 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 1239 AGCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 1180 Query 142563 CCCCAC 142568 |||||| Sbjct 1179 CCCCAC 1174 >seq4429 Length=1394 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 316 AGCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 257 Query 142563 CCCCAC 142568 |||||| Sbjct 256 CCCCAC 251 >seq70 Length=114167 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 77744 AGCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 77803 Query 142563 CCCCAC 142568 |||||| Sbjct 77804 CCCCAC 77809 >seq4 Length=55451 Score = 102 bits (112), Expect = 2e-16 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| || |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 22965 AGCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 23024 Query 142563 CCCCAC 142568 |||||| Sbjct 23025 CCCCAC 23030 >seq5480 Length=1187 Score = 100 bits (110), Expect = 6e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| || |||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 344 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 285 Query 142564 CCCAC 142568 ||||| Sbjct 284 CCCAC 280 >seq149 Length=121200 Score = 100 bits (110), Expect = 6e-16 Identities = 61/65 (94%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| || |||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 39720 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 39661 Query 142564 CCCAC 142568 ||||| Sbjct 39660 CCCAC 39656 >seq14654 Length=53260 Score = 96.9 bits (106), Expect = 7e-15 Identities = 269/410 (66%), Gaps = 22/410 (5%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 ||||| || || | |||||| |||| ||||| |||||||| |||| || ||||| || Sbjct 47920 TCGAAAAAGTTGGTCTTGCCTTCCAAGGAGATGAGCTCCATCCAGTCAAACGGGTTCGTA 47979 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||| ||| || || || | | |||||| ||||||||||| | Sbjct 47980 GCGTTGTAGATCTTCTCGCAGCCGAGGGCCACCAGCAGGCGGTCCGCCACAAACTCAATG 48039 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAAT----CATACGACAAGGAATTGCCTCACA 251738 ||||| | ||| || || | ||||||||| || | || |||| | | |||||| Sbjct 48040 TACTGGCACATGAGCTCGGCGTTCATGCCGATGAGCCTCACTGGAAGGGACTCGCTCACA 48099 Query 251739 GATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTT------CACCT-GTG 251791 || |||||||| | | |||||||| | | ||| ||| ||| | || Sbjct 48100 ----AACTCCTTTTCAATCTCCACTGCCTCAGCGATAAT---CTTGGTGGGCACGTCGTT 48152 Query 251792 CCAGAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGAC 251851 || | | |||||| | | | ||| ||||| | |||| | ||||| | Sbjct 48153 GGAGGGTC----TGTTCTGGATCATATTGTAGAGGAGGCAGGCAAAGTCACAGTGCATGC 48208 Query 251852 CCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCC 251911 ||||||| | ||||| ||| || | || || |||||||| | || | ||| Sbjct 48209 CCTCGTCCCTGCTGATCTGCTCATTACTGAAACAAAGTCCAGGCATAAGGCCTCTCTTCT 48268 Query 251912 TGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 | | ||| ||||| ||||||||||| |||||||| | | ||||| ||| Sbjct 48269 TCAACCAAAAGATGGCGCAAAAGGAACCAGAGAAAAAGATGCCCTCCACA 48318 >seq768 Length=3828 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| | |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 1004 AGCCGAGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 1063 Query 142563 CCCCAC 142568 |||||| Sbjct 1064 CCCCAC 1069 >seq213 Length=29148 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| | |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 28138 AGCCGAGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 28197 Query 142563 CCCCAC 142568 |||||| Sbjct 28198 CCCCAC 28203 >seq132 Length=92410 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| | |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 76513 AGCCGAGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 76454 Query 142563 CCCCAC 142568 |||||| Sbjct 76453 CCCCAC 76448 >seq60 Length=208823 Score = 96.9 bits (106), Expect = 7e-15 Identities = 61/66 (92%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| | |||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 203318 AGCCGAGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAG 203259 Query 142563 CCCCAC 142568 |||||| Sbjct 203258 CCCCAC 203253 >seq17 Length=220212 Score = 96.9 bits (106), Expect = 7e-15 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 182985 TAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 182928 >seq5388 Length=1203 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| || |||||||||||||||||||| ||||||||||||| ||||||| ||| |||||| Sbjct 1057 GCCGGGCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGGGGGGTCGAGC 1116 Query 142564 CCCAC 142568 ||||| Sbjct 1117 CCCAC 1121 >seq63 Length=199166 Score = 91.5 bits (100), Expect = 3e-13 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| Sbjct 39657 TAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 39600 >seq2 Length=125603 Score = 91.5 bits (100), Expect = 3e-13 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| Sbjct 95937 TAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 95880 Score = 91.5 bits (100), Expect = 3e-13 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| Sbjct 100338 TAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 100395 Score = 91.5 bits (100), Expect = 3e-13 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCAC 142568 |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| Sbjct 100939 TAGCTCAGTCGGTAGAGCGCAAGACTTTTAATCTTGTGGTCGTGGGTTCGAGCCCCAC 100882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027643226531859