Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq7184 113 4e-20 seq6154 104 2e-17 seq201 104 2e-17 seq104 100 2e-16 seq629 95.1 1e-14 seq14642 86.0 5e-12 seq5 82.4 6e-11 >seq7184 Length=931 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 |||||||| || | | || || || | || || || ||||| ||||||||||| | Sbjct 144 CCGCCACGAAGACGAAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCAGCC 203 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || || || || || || || ||| ||||||||||||| ||||| || ||| Sbjct 204 AAGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGA 263 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || ||||| |||||||| || | | || | |||||||| | || || Sbjct 264 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACT 323 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| ||| | || || ||||| ||||| || || || |||||||| Sbjct 324 TCCAGGGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 370 >seq6154 Length=1076 Score = 104 bits (114), Expect = 2e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 114247 CGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTA 114306 || |||| | |||||| ||||| |||||||||||||| ||||| ||||||||||| | Sbjct 1076 CGAAGATCAAACGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGGATCTTTTGTTTCA 1017 Query 114307 GCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTT 114366 | ||||| |||||||| | || || |||| ||| | |||||||| |||| || | Sbjct 1016 CGTTTTCAATGGTGTCGGAGCTCTCCACTTCCAGGGTGATGGTTTTGCCAGTCAACGTCT 957 Query 114367 TTACAAAAATCTGCATG 114383 | || || ||||||||| Sbjct 956 TGACGAAGATCTGCATG 940 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || || | || || || || || |||||||| ||| || |||||| || || Sbjct 922 AACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTC 863 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 || || || || ||| |||| | || || || || || ||||||||||| ||||| Sbjct 862 CAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGGGGAATGCCTTCCTTGTCCTG 803 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| || || | | || | |||||| | ||| || || |||| ||| | || || Sbjct 802 GATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGGACTCCACCTCCAGGGTGATGGTCTT 743 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || || || || ||||| ||||| Sbjct 742 TCCAGTGAGGGTCTTGACGAAAATTTGCAT 713 >seq201 Length=21658 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || || | || || || || || |||||||| ||| | || || || || Sbjct 13978 AACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTC 13919 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 | || || |||||| ||||||| ||||| ||||| |||||||||||||| ||||| Sbjct 13918 CAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTG 13859 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| || || | | || | |||||||| | || || |||| ||| | || || Sbjct 13858 GATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTAATAGTCTT 13799 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||||| ||||| || || || |||||||| Sbjct 13798 GCCGGTAAGAGTCTTGACGAAGATCTGCAT 13769 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||||||||| | ||| || ||| || || || || || Sbjct 14193 GTGGACTCCTTCTGGATGTTGTAATCAGCGAGAGTGCGGCCATCCTCCAGCTGCTTGCCC 14134 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| ||||| ||||| || ||||||||||| ||||| |||||||| || Sbjct 14133 GCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTTTGCTTG 14074 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| | | || || |||| ||| | || ||||| || | || Sbjct 14073 ACGTTCTCGATGGTGTCAGAGCTCTCCACCTCCAAGGTAATAGTCTTGCCAGTTAAGGTC 14014 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || || || ||||||||| || Sbjct 14013 TTGACGAAGATCTGCATGCCT 13993 >seq104 Length=38954 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || || | || || || || || |||||||| ||| || || || ||| || Sbjct 25988 AACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTC 26047 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 || || || |||||| |||| | |||||| ||||| |||||||||||||| || || Sbjct 26048 CAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTG 26107 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| || |||| | ||| | |||||| | || ||||| || | || | || || Sbjct 26108 GATCTTCTGCTTTACGTTTTCGATGGTGTCAGAAGACTCGACCTCAAGAGTGATGGTCTT 26167 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || || || || |||||||| Sbjct 26168 TCCAGTCAAGGTCTTGACGAAGATCTGCAT 26197 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | || || || ||||| |||||||| ||| Sbjct 26196 ATACCACCGCGCAGACGGAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCG 26255 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| || || || || || || ||| |||| || ||||| ||||| || Sbjct 26256 GCCAAGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGG 26315 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| |||||||| || | | || | |||||||| | || Sbjct 26316 GGAATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCC 26375 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || || || || || || || || ||||| Sbjct 26376 ACCTCCAAAGTGATTGTCTTACCAGTGAGGGTCTTGACGAAGATTTGCAT 26425 >seq629 Length=7623 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||||||||| | ||| ||| || || || || || || Sbjct 3933 GTGGACTCCTTCTGGATGTTGTAATCAGCGAGAGTGCGACCGTCCTCCAGCTGCTTGCCG 3874 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | |||||| ||||| || ||||||||||| ||||| ||||| || || Sbjct 3873 GCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTC 3814 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| | || ||||| |||| || | || ||||| || || || Sbjct 3813 ACGTTCTCGATGGTGTCAGAAGACTCGACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTC 3754 Query 114366 TTTACAAAAATCTGCAT 114382 || || ||||| ||||| Sbjct 3753 TTGACGAAAATTTGCAT 3737 >seq14642 Length=99085 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| || ||||| || || || || || || Sbjct 59347 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCCAGCTGCTTGCCG 59406 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| ||||| ||||| || ||||||||||| ||||| |||||||| || Sbjct 59407 GCAAAGATGAGGCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTTTGCTTG 59466 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| | || || || | ||| | || || || || || || Sbjct 59467 ACGTTCTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGGTCTTTCCCGTGAGGGTC 59526 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 59527 TTGACGAAGATTTGCAT 59543 >seq5 Length=69586 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | ||||| || || || |||||||| ||| Sbjct 14142 ATACCACCACGGAGGCGAAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCG 14201 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || || || || || ||| |||| | ||| || |||||||| Sbjct 14202 GCGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGTTGCTGGTCCGGG 14261 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||| || || | | || | |||||| | || || Sbjct 14262 GGAATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAAGACTCC 14321 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || || || || || ||||| ||||| Sbjct 14322 ACTTCGAGAGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAAATTTGCAT 14371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420059135416788