Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3 376 5e-99 seq14654 361 1e-94 seq182 253 4e-62 >seq3 Length=147229 Score = 376 bits (416), Expect = 5e-99 Identities = 1054/1592 (66%), Gaps = 53/1592 (3%) Strand=Plus/Plus Query 243877 GTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGA-GGT 243935 ||||| | ||||||||| |||| || | | | || || || |||||| ||| | ||| Sbjct 142675 GTTGAAGCTCTGGCTCTGATCGATAAACGCCCCTCGATCCGCCGCCATGTCGATCAAGGT 142734 Query 243936 CCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTT 243995 | | || || | ||| || | |||||||| | ||| | ||| || |||| | Sbjct 142735 ACGT-TGGGACACCTCCCACACGGTCTTGTACAGCTTCTTAATGTGTTCCGGGATGCAGG 142793 Query 243996 CGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACA 244055 | | || || || ||||| ||||| | | || ||| | || | || |||||| Sbjct 142794 CAAGGTGTTGAACAGAGCCGTTGTGAGCCACCAGTTGGTTCTTCAGCTCGGCGCTCCACA 142853 Query 244056 GGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACA 244115 |||||||| ||| | | | || ||| ||||| || | || ||||| | || Sbjct 142854 GGCCCAAGTTTCTCAGGTCTTGCATCAAGTGGCTGTTGACAATGGTGAAGTCTCCAGCCA 142913 Query 244116 GCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTA 244175 | |||||| ||||| |||| | || ||||| | || ||| ||||||| || | Sbjct 142914 AGATGCGGCGAGAGTAGATGTTGGAGGTGTAGGGCTCAAAGCACTCATTGTTGCCGAGGA 142973 Query 244176 TCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCC 244235 |||||| ||| || || |||||||| | ||||| || |||||||||| ||||||| Sbjct 142974 TCTGCGAGGTGGAGGCTGTAGGCATGGGAGCCACCAACAAGCTGTTCCTCAGGCCGTGCT 143033 Query 244236 TCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACAT--GC-CCGA--GAGGTCCTCGCG 244290 || ||| | | || || ||||||||| | || |||| |||| | Sbjct 143034 CCTTGATCTTCTGCTTCAGGCCGGCCCAGTCCCAGTTCTGCTCCGAACGAGGCACC---- 143089 Query 244291 TTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGT 244350 | ||||| | ||||||||||| || || ||||| | || ||||| |||| Sbjct 143090 ----ACTCCCCAGAGGTCAAACTGCAAGAGGCCTTTGCTTGCAGGACTGCCAGGATAGGA 143145 Query 244351 CGGGTAGGGACCGTCGCGCTGGGCCAGCT---TACA-GCTCTCGTCGAGGGCGGCGTAGT 244406 | ||||||| || || || ||| | || | | ||| || || || ||| ||| Sbjct 143146 CTGGTAGGGGCCCTCACGAGCGGCAATCTCGTTGGATGCTGTC----AGCGCAGCGAAGT 143201 Query 244407 AGATGGTCTCGAAGATCATCTTG-TTCATGTC-GCGGGC-CTTGCCGCAGGTGAAGGGGA 244463 | |||||||| ||||| |||| | || | ||| || | | |||| | | |||||| Sbjct 143202 AAATGGTCTCAAAGAT-ATCTCGGTTGAGGTCAGCAGCCTCTTGGCTCTCCC--AGGGGA 143258 Query 244464 TGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTC 244523 | |||||||| |||||||| || || || ||||| || || |||||||| | || | Sbjct 143259 AACGCATCATCAAAAAGACGTCCGCAAGGCCTTGCACACCAATTCCGATGGGACGATGAC 143318 Query 244524 GCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGA 244583 | ||| ||| || ||| ||||| || ||||| |||| || |||||||||| Sbjct 143319 GAAGGTTCGAGTTGCGAGCCTCGACAACGGGATAGTAGTTGACGTCAATGACCTTGTTGA 143378 Query 244584 GGTTGCGGGTGATCATGCGGACGACGTCG-GCCAGCAGCTG----AAAGTCGTACTC-GT 244637 ||||||| |||| | || || ||| | | | |||| || ||| ||| | Sbjct 143379 GGTTGCGAGTGACGACCTTAACCACCTCGAACAAACGGCTGTGGTCAAATCGGGCTCGGC 143438 Query 244638 AGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGC 244697 | || || |||||| |||||||| | || |||| || ||||||| Sbjct 143439 CGCTGTCTGCGTCGATGG------ACACAAACTTGGGAAGAGCGAGAGAAGCGAGGTTGC 143492 Query 244698 AGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACT 244757 | || ||||| || ||| | |||||||| | ||||| ||||| ||||| || | Sbjct 143493 ACACAGCCACTTCGTCCTTGGAGGTGTACTCCATGATCTCCGTGCAAAGGTTGCTTGAAC 143552 Query 244758 TGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGA 244817 |||||||| |||| ||| || ||||||||| |||||| | ||||||||| ||||| Sbjct 143553 GAATGGTGCCGAGGTTCTGTTGGTTGGACTTGCGGTTGCACGAGTCCTTGTATAGCATAT 143612 Query 244818 AGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGA 244877 ||||| |||||||| | |||| | |||| | | |||||| || ||||| | Sbjct 143613 AGGGCGTGCCGGTCTCTATCTGGCTCTCCAGGATGGCGAACCAGAGCTCTTGGGCCTTAA 143672 Query 244878 CCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGC 244937 | |||| | || |||||| ||||| || ||||| || ||||| ||||| | Sbjct 143673 CGCTCCTCCTGGCTCGGCCCTCCTGTTCGTATCGAGTGTAGAGCGCCTCAAACTCCTCTC 143732 Query 244938 CCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCACTCGCCGCCG 244996 ||||||| || | | ||| ||| | || ||| || | || |||||| | Sbjct 143733 CCCAGACATCAGCCAAGCC-GGGAGCTTCGTTGGGACAAAACAGGGACCACTCCTGATTG 143791 Query 244997 TCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTC 245056 || || | || |||||| ||||| || | |||||| || | |||||||| |||| Sbjct 143792 CTCTCCACTCGCTTCATGAATAGGTCCGGAACCCAGAGCGCGTAAAAGAGGTCTCTGGCG 143851 Query 245057 CTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGC 245116 | | |||| ||| ||| ||||||| ||||||||| ||| || || ||||| ||||| Sbjct 143852 CGCAGCTCCTCCTTGCCGTGGTTCTTCTTCAGCTCCAGAAACTCGAAAACGTCCGCGTGC 143911 Query 245117 CAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATC 245176 || ||||||| ||||||||| | || || || ||| ||||| ||||| || Sbjct 143912 CATGGCTCCAAGTAGACAGCAAAAGCTCCTTTGCGTTTGCCTCCTCCTTGGTCGACGTAT 143971 Query 245177 CTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGT 245235 || | || | |||| |||| ||| || | || | | ||||| || ||| || || Sbjct 143972 CTGGC-AGTGTCGTTAAAGACGCGAAGCATCGGGATGAGACCGTTCGACGTGCCATTAGT 144030 Query 245236 GCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----ATGCCTAGTCCGC 245291 || ||||||| | | | | | || ||| || || || | ||| | || | Sbjct 144031 TCCACGGATGTAGCTGTGCGAGGCACGGA--TTG-TG-TGTACGCTGAGGCCGATGCCAC 144086 Query 245292 CGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGT 245351 | ||| ||||||||| | |||||| ||| | |||||| |||||||| ||||||| Sbjct 144087 CAGCGGCCTTGGAGATCAAGGCGCATTGCTTTAGGGTGTCGTAGATGCCCTCGATGCTGT 144146 Query 245352 CCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGA 245411 || | |||| |||||| ||||||||| || || || ||| ||| | ||||| Sbjct 144147 CCTCCCTCATCGTGAGCAAAAAGCAGGAAGAGAGTTGCGGCCGCTCTGTGCCGGCGTTGA 144206 Query 245412 ACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGG 245443 | ||||||||| ||||||| ||||||||| || Sbjct 144207 AGAGAGTGGGGGTGGCGTGAGTAAAGTAGAGG 144238 >seq14654 Length=53260 Score = 361 bits (400), Expect = 1e-94 Identities = 598/851 (70%), Gaps = 24/851 (3%) Strand=Plus/Minus Query 42291 CACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAG 42350 ||||| | |||||| |||||||||||||| || | | |||||||||||||||| Sbjct 48746 CACCACAAGATCTGGGAGATGTACAAGAAGGCCGAGGCCAGCTTCTGGACCGCCGAGGAG 48687 Query 42351 ATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTC 42410 | ||||| ||| | || ||| |||| || || |||||| |||| | ||| Sbjct 48686 GTGGACCTTGCCCAAGATCTCACCGACTGGAAGAAGCTCTCTGAGGACGAGCGCTATTTT 48627 Query 42411 CTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC 42470 ||| || | ||||||||||| |||||||| ||||| || || |||||| ||||| Sbjct 48626 ATCACCCACGTCCTGGCCTTCTTTGCCGCCTCGGACGGAATCGTTGTGGAGAACTTGGCC 48567 Query 42471 ACCAGGTTCATGAAAGAGGTGCA-GTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGAT 42529 | | |||||||| |||||||| |||| ||||| ||||||||||||||||| ||||| Sbjct 48566 GTCCGCTTCATGAAGGAGGTGCAAGTACCC-GAGGCTCGCTGCTTCTACGGCTTTCAGAT 48508 Query 42530 AGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGA 42589 ||||| ||||| | ||||| ||| ||||| || ||| || |||| ||| | ||| Sbjct 48507 CGCCATTGAGAATATCCACTCGGAGATGTACTCCCTCCTGATCGACACCTACGTGAAGGA 48448 Query 42590 TCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAA 42649 ||| | ||| || | || ||||| ||||| ||||| |||| | || ||||| Sbjct 48447 CCCCTTGGAGAAGGACCGCCTCTTCAACGCCATCGAGACCGTGCCTACCGTCCGAAAGAA 48388 Query 42650 GGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGT 42709 || || ||||| |||| ||||| || | ||||||| || | | |||| || Sbjct 48387 AGCTGAGTGGGCCATCAAGTGGATAGAAAACCCCGACG---GCTTTGCTCACCGGCTCGT 48331 Query 42710 AGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT 42769 ||||| | || || ||||||||||| ||||| || |||| | ||||||| ||| | Sbjct 48330 GGCCTTCGCTGCTGTGGAGGGCATCTTTTTCTCTGGTTCCTTTTGCGCCATCTTTTGGTT 48271 Query 42770 CAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACG 42828 ||| ||| ||| | ||||| ||||| ||| || || | ||||||||||||| Sbjct 48270 GAAGAAGAGAGGCCT-TATGCCTGGACTTTGTTTCAGTAATGAGCAGATCAGCAGGGACG 48212 Query 42829 AGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC---TCGAGCCACCTCAGGCACAAGC 42885 |||| |||| | ||||||||||||||||| | | || ||| | ||| | Sbjct 48211 AGGGCATGCACTGTGACTTTGCCTGCCTCCTCTACAATATGATCCA------GAACAGAC 48158 Query 42886 CCTCGAAGGAGCGGGTCCGGGCC---ATCATCACGGAGGCCGTGGAGATCGAGAAGGAGT 42942 |||| || || || | || || || ||| | ||||| |||||||| || ||||||| Sbjct 48157 CCTCCAACGA-CGTGCCC--ACCAAGATTATCGCTGAGGCAGTGGAGATTGAAAAGGAGT 48101 Query 42943 TCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGT 43002 | | | |||| || || ||| || ||||||||||| ||| ||||||||| ||| Sbjct 48100 TTGTGAGCGAGTCCCTTCCAGTGAGGCTCATCGGCATGAACGCCGAGCTCATGTGCCAGT 48041 Query 43003 ACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAAC 43061 |||| ||| || || |||| || || ||| | || | || | |||||||| Sbjct 48040 ACATTGAGTTTGTGGCGGACCGCCTGCTGGTGGCCCTCGGCTGCGAGAAG-ATCTACAAC 47982 Query 43062 ACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTC 43121 | || ||| || |||| |||||| |||||| ||||| |||||||||||||||||| Sbjct 47981 GCTACGAACCCGTTTGACTGGATGGAGCTCATCTCCTTGGAAGGCAAGACCAACTTTTTC 47922 Query 43122 GAGAAGCGCGT 43132 |||| |||||| Sbjct 47921 GAGAGGCGCGT 47911 >seq182 Length=84632 Score = 253 bits (280), Expect = 4e-62 Identities = 488/711 (69%), Gaps = 29/711 (4%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 |||||||||||||| ||| | ||||| | |||||| | ||||||| ||||| Sbjct 21766 ATGTACAAGAAGGCCCAGGCTAGCTTTTGGACGGTGGAGGAGGTAGACCTGGTGCAGGAC 21825 Query 42369 ACGGCCGGCTGGGAGTCACTGTCT----GAGAACGAAAAGTTTTTCCTCAAAAACATACT 42424 ||| |||| || ||| || ||| ||||| || |||| || | | Sbjct 21826 CTTACCGACTGG-AGCCACAAGCTTGTGGAGGACGAACGCCACTTTATCAAGCACGTGTT 21884 Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAA 42484 |||||| ||||| ||||| || ||||| || |||||||| || || | |||||||| Sbjct 21885 GGCCTTTTTCGCTGCCTCGGATGGCATCGTGGTGGAGAACCTTGCTGCCCGCTTCATGAA 21944 Query 42485 AGAGGTGCAGTACTTT--GAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || || ||| ||||| || |||||||||||||| || || ||||| |||||| Sbjct 21945 GGAAGTTCA--ACTGCCGGAGGCACGTTGCTTCTACGGCTTTCAAATCGCCATGGAGAAC 22002 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAG 42599 | ||||| ||| ||||| | ||||||| |||| ||| || || ||| || Sbjct 22003 ATCCACTCGGAGATGTACTCG---CTGCTCATCGACACCTACGTCAAAGA---CGT-GAA 22055 Query 42600 CGTAACGG----GCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655 | || || ||| || || ||||| |||||| |||| || | ||||||||||| || Sbjct 22056 AGAAAAGGCTAAGCTCTTTAACGCCATTGAGACGGTGCCTAGCGTGAAGAAGAAGGCCGA 22115 Query 42656 CTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTT 42715 |||||||| ||||| || | || | || || | | |||| | ||||| Sbjct 22116 ATGGGCGCTGCGTTGGATAGAAAAGCCACAAGCT---TTTGCTCTGCGGCTCATTGCCTT 22172 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775 | |||| || || |||||||||||||||||| ||||| | ||||||||||||| ||| | Sbjct 22173 TGCCGCAGTGGAAGGCATCTTCTTCTCGGGCTCCTTCTGCGCCATCTTCTGGCTGAAGAA 22232 Query 42776 GAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835 | | | |||||| || |||| |||| ||||| ||||| |||||||| || || | Sbjct 22233 AAGAGGGCTGATGCCTGGGCTCAGCTTCAGCAACGAGCTCATAAGCAGGGATGAAGGCAT 22292 Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGA 42895 |||| | |||||||| || | |||||| || | ||| |||| || | |||| Sbjct 22293 GCATTGTGACTTTGCTTGTATGCTGTTC---GGCATGTTAAGGGACAAACCGCCCGAGGA 22349 Query 42896 GCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTC 42955 | |||| ||||| |||| || || || |||||||||||||| | | |||| Sbjct 22350 GATCATCCGTCGGATCATTGCGGAAGCTGTTGACATCGAGAAGGAGTTTGTTTCCGAGTC 22409 Query 42956 GCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACAT 43006 || || || || |||||||||| || ||||||||| |||| || Sbjct 22410 TCTTCCTGTTCGACTCATCGGCATGAATGCGGAGCTCATGTGCCAGTATAT 22460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944165689476240