Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq7184 114 1e-20 seq14642 98.7 8e-16 seq119 98.7 8e-16 seq294 95.1 1e-14 seq1075 93.3 3e-14 seq629 89.7 4e-13 seq104 86.0 5e-12 seq2450 82.4 6e-11 >seq7184 Length=931 Score = 114 bits (126), Expect = 1e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| |||| ||||| || || ||| ||||||||| |||||||| || ||| Sbjct 600 CCTCCCCTCAGACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 659 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || || |||| |||| |||||||| ||||| ||||||||||||||||| || Sbjct 660 AAGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGAGGG 719 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTA---TCAGTAGATTCG 34077 | || || |||||| || ||||||| || | | || || |||| ||||| Sbjct 720 ATGCCTTCCTTGTCCTGGATCTTTTGCT---TGACATTTTCAATAGTGTCAGAGGATTCC 776 Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | || || || || ||||| || || || || ||||| ||||| Sbjct 777 ACTTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 826 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||| | || |||| ||||| || || ||| ||||||||| |||||||| || || Sbjct 371 ACCTCCACGGAGACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGC 430 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 ||| || | || |||| ||||||||||| || || ||||||||||| || || Sbjct 431 CAAGGTACGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGG 490 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTT 34049 | || ||| |||||| ||||| ||||| Sbjct 491 AATGCCCTCCTTGTCCTGGATTTTCTGCTT 520 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || || |||| || || ||| |||||| || ||||||||||| ||||| || Sbjct 153 AGACGAAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCAGCCAAGGTGCGG 212 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| |||| ||||||||||| || || || |||||||| || || | || ||| Sbjct 213 CCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCC 272 Query 34030 TTGTCCATAATTTTTTGCTT 34049 |||||| || |||||||| Sbjct 273 TTGTCCTGGATCTTTTGCTT 292 >seq14642 Length=99085 Score = 98.7 bits (108), Expect = 8e-16 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| || || |||| || || ||| ||||||||| |||||||| || ||| Sbjct 59317 CCTCCCCTCAGACGAAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 59376 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || || |||| |||| |||||||||||||| || ||||||||||| || || Sbjct 59377 AAGGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCAGGGGGA 59436 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGAT-TCGC 34078 | || || |||||| || |||||||| | | ||| | | || | || | || Sbjct 59437 ATGCCTTCCTTGTCCTGGATCTTTTGCTTGA-CGTTCTCGATGGTGTC-GGAGCTCTCCA 59494 Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 |||| || || || ||||| || || || || || |||||||||||| Sbjct 59495 CCTCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAGATTTGCATT 59544 >seq119 Length=72801 Score = 98.7 bits (108), Expect = 8e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||||| |||||||| |||| ||||||||||||||||| ||||| || ||| Sbjct 21736 CCTCCCCTCAGCCTTAGCACCAGGTGAATGGTGCTCTCCTTCTGAATATTGTAGTCGGCC 21677 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | | | |||| |||| ||| |||||||||| || ||||| || || || || Sbjct 21676 AGGGTCCTCCCGTCTTCCAGCTGCATGCCGGCAAAGATGAGGCGTTGTTGGTCGGGGGGA 21617 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTT 34049 | || ||| |||||| ||||| |||| Sbjct 21616 ATGCCCTCCTTGTCCTGTATTTTCAGCTT 21588 >seq294 Length=52215 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| || || || || || || ||| |||||||||||| |||||||| || Sbjct 28958 CCTCCCCTCAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGAATATTGTAATCAGCG 29017 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| |||||||||||| || |||| ||||||||| || || Sbjct 29018 AGGGTACGGCCGTCCTCCAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGGA 29077 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCA 34079 | | ||| |||||| || || ||||| | | ||| | | || | || || Sbjct 29078 ATACCCTCCTTGTCCTGGATCTTCTGCTTCA-CGTTCTCGATGGTGTCCGAGGACTCCAC 29136 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||||| || || || ||||| || || || || || || ||||||||| Sbjct 29137 TTCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAAATTTGCATT 29185 >seq1075 Length=2391 Score = 93.3 bits (102), Expect = 3e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| || || |||| || || ||| ||||||||| |||||||| || ||| Sbjct 1447 CCTCCCCTCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 1388 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| |||| |||||||||||||| || ||||||||||| || || Sbjct 1387 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGA 1328 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTT 34049 | || ||| |||||| || || ||||| Sbjct 1327 ATGCCCTCCTTGTCCTGGATCTTCTGCTT 1299 >seq629 Length=7623 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 |||||||| || || || |||| || || ||| ||||||||| ||||||||||| || Sbjct 3963 CCTCCTCTAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCG 3904 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | || || |||| |||| ||||||||||| || |||| |||||||| || || Sbjct 3903 AGAGTG-CGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGGGG 3845 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGC 34078 | || || |||||| || || ||||| | | ||| | | |||| ||| ||| Sbjct 3844 AATGCCTTCCTTGTCCTGGATCTTCTGCTTCA-CGTTCTCGATGGTGTCAGAAGACTCGA 3786 Query 34079 ATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 || | || || || || || || || || || || || ||||||||| Sbjct 3785 CCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCATT 3736 >seq104 Length=38954 Score = 86.0 bits (94), Expect = 5e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || || |||| || || ||| |||||| || |||||||| || || Sbjct 26198 ACCACCGCGCAGACGGAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGC 26257 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 ||| || |||| |||| ||||||||||| || |||||||||||||| || || Sbjct 26258 CAAGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGG 26317 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTT 34049 | || || |||||| || |||||||| Sbjct 26318 AATGCCTTCCTTGTCCTGGATCTTTTGCTT 26347 >seq2450 Length=1890 Score = 82.4 bits (90), Expect = 6e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || |||| |||| ||| || || ||||||||||| |||||||| || |||| |||| Sbjct 792 AGTCGCAAAACCATATGCAGAGTACTCTCCTTCTGGATGTTGTAGTCCGCCAGGGTTCGC 851 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | | |||| ||| |||||||||| || ||||| ||||| || || | || ||| Sbjct 852 CCCACCTCCAGCTGCCTGCCGGCAAAGATGAGGCGTTGCTGGTCGGGAGGGATGCCCTCC 911 Query 34030 TTGTCCATAATTTTTTGC 34047 |||||| || |||||| Sbjct 912 TTGTCCTGTATCTTTTGC 929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396991268628598