Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq5 132 1e-25 seq7184 123 6e-23 seq6154 122 2e-22 seq201 122 2e-22 seq104 120 7e-22 seq3021 118 3e-21 seq294 116 9e-21 seq1590 114 3e-20 seq629 114 3e-20 seq14642 111 4e-19 seq5612 111 4e-19 seq5330 104 6e-17 seq4150 104 6e-17 seq1075 100 7e-16 seq11709 95.1 3e-14 seq2163 93.3 1e-13 seq1840 91.5 3e-13 >seq5 Length=69586 Score = 132 bits (146), Expect = 1e-25 Identities = 171/235 (73%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | |||| || || || ||||| || ||||||||| Sbjct 14145 CCACCACGGAGGCGAAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 14204 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||||| ||| || || || ||| Sbjct 14205 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGTTGCTG---GTCCGGG 14261 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || |||||||| ||| |||||||| || || | || || || Sbjct 14262 GGAATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAAGACTCC 14321 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGT 288478 |||||||| ||||| ||||| || || || ||||||||||| || |||||| ||| Sbjct 14322 ACTTCGAGAGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAAATTTGCATTGTGT 14376 >seq7184 Length=931 Score = 123 bits (136), Expect = 6e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| | ||||| ||||| || | || || || || ||| Sbjct 636 TCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAG 695 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTT 288401 ||||| ||||| ||| ||||| ||||| || |||||||| ||| |||| || || Sbjct 696 ATCAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGGATCTTTTGCTTG-ACATT 754 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| |||| || ||||| ||||| | ||||| ||||| ||||| || |||||||| Sbjct 755 TTCAATAGTGTCAGAGGATTCCACTTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 814 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 815 GAAGATCTGCAT 826 Score = 116 bits (128), Expect = 9e-21 Identities = 171/237 (72%), Gaps = 14/237 (6%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 ||||| || || || | ||| || | || | ||| || |||||||| || || || Sbjct 141 TGTCCGCCACGAAGACGAAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCA 200 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || | ||||| ||||| || | || || || |||||||| |||||||| || || Sbjct 201 GCCAAGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGG---TCG 257 Query 288364 GGG---ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCG---CT 288416 ||| || || || || |||||||| ||| |||| |||||| || || | ||| || Sbjct 258 GGGGGAATGCCCTCCTTGTCCTGGATCTTTTGCTT-CACGTTCTCGATGGTGTCGGAGCT 316 Query 288417 CGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| || ||||| ||||| ||||| |||||||||||||| |||||||| Sbjct 317 C---TCCACTTCCAGGGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 370 >seq6154 Length=1076 Score = 122 bits (134), Expect = 2e-22 Identities = 173/241 (72%), Gaps = 7/241 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||||||||| | ||| || | || | ||| || || ||||| || |||| Sbjct 943 CATG-CCACCGCGGAGACGAAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGT 885 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| || || || ||||| || | || || || |||||||||| || || ||| | Sbjct 884 CGGCCAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGA---T 828 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 | ||| || ||||| || |||||||| ||| |||||||| || || | || | Sbjct 827 CGGGGGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGG 768 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGT 288478 | || || || || ||||| ||||| || || || ||||||||||| || |||||| ||| Sbjct 767 ACTCCACCTCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAAATTTGCATTGTGT 708 Query 288479 T 288479 | Sbjct 707 T 707 >seq201 Length=21658 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||||||| ||||| ||||| || || || || || |||||| Sbjct 13959 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCCAACTGCTTGCCAGCGAAG 13900 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || || || ||||| || |||||||| ||| || ||||| Sbjct 13899 ATGAGGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTTC 13840 Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| ||| || ||||| || || || ||||| ||||| ||||||||| Sbjct 13839 TCGATGGTGTCGGAGCTC---TCCACTTCCAGGGTAATAGTCTTGCCGGTAAGAGTCTTG 13783 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 13782 ACGAAGATCTGCAT 13769 >seq104 Length=38954 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| || | ||||| ||||| || | || || || |||||| Sbjct 25779 TCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGCCCGTCCTCCAGCTGCTTGCCCGCGAAG 25838 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| || || || | || || ||||| || |||||||| ||| |||||||| Sbjct 25839 ATCAGGCGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTC 25898 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || || || || ||||| ||||| ||||| ||||||| ||||||||| Sbjct 25899 TCGATAGTGTCAGAAGACTCAACCTCGAGAGTGATAGTCTTTCCGGTCAAGGTCTTGACG 25958 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 25959 AAGATCTGCAT 25969 Score = 114 bits (126), Expect = 3e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| || ||||| || || || | || || || |||||| Sbjct 26007 TCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAG 26066 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC-GCTTTCACGTT 288401 |||| |||||| || || || ||||| ||||| ||||| ||| ||||| ||||| Sbjct 26067 ATCAAACGCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTCTGCTTT-ACGTT 26125 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | || || || || || || ||||| ||||| || |||| |||||||| Sbjct 26126 TTCGATGGTGTCAGAAGACTCGACCTCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTGAC 26185 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 26186 GAAGATCTGCAT 26197 Score = 109 bits (120), Expect = 1e-18 Identities = 168/236 (71%), Gaps = 8/236 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || || | || | ||| || |||||||| || |||||||| Sbjct 26199 CCACCGCGCAGACGGAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCC 26258 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || ||||| || | || || || ||||||||||| ||||| || | || Sbjct 26259 AAGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGA 26318 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 || ||||| || |||||||| ||| || |||||||| || || | || |||| || Sbjct 26319 ATGCCTTCCTTGTCCTGGATCTTTTGC-TTCACGTTCTCGATGGTGTCGGAGCTC---TC 26374 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGT 288478 || || | ||||| ||||| || || || ||||||||||| || |||||| ||| Sbjct 26375 CACCTCCAAAGTGATTGTCTTACCAGTGAGGGTCTTGACGAAGATTTGCATTGTGT 26430 >seq3021 Length=1716 Score = 118 bits (130), Expect = 3e-21 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| | ||||| ||||| || | || || || ||||| Sbjct 25 TCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAA 84 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTT 288401 ||||||||||| ||| |||||||| || ||||||||||| ||| || ||||| || Sbjct 85 ATCAGACGCTGCTGATCGGGGGGGATTCCCTCCTTATCCTGGATCTTTTGC-TTCACATT 143 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| || || || ||||| ||||| || || || || || ||||| || Sbjct 144 CTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATAGTTTTGCCTGTGAGCGTCTTCAC 203 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 204 GAAGATCTGCAT 215 >seq294 Length=52215 Score = 116 bits (128), Expect = 9e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| ||||| || | ||| || || || ||||| || || ||||| || || ||||| Sbjct 28972 AAGGACGAGGTGGAGGGTGGACTCCTTCTGAATATTGTAATCAGCGAGGGTACGGCCGTC 29031 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 || | ||| || || |||||||||| ||||| || | || || || || || || Sbjct 29032 CTCCAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 29091 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 |||||| ||| |||||||| || || | || || || |||||||| ||||| || Sbjct 29092 CTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGGACTCCACTTCGAGGGTGATGGT 29151 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||| || || || ||||||||||| || |||||| || Sbjct 29152 CTTTCCCGTGAGGGTCTTGACGAAAATTTGCATTGTG 29188 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| || ||||| ||||| || | ||| || || |||||| Sbjct 28766 TCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCCAGTTGCTTGCCGGCGAAG 28825 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| || || || ||||| ||||| || |||||||| ||| |||||||| Sbjct 28826 ATCAGGCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTC 28885 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || || | || || ||||| || |||| |||||| Sbjct 28886 TCGATGGTGTCGGAGCTC---TCCACCTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTG 28942 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 28943 ACGAAGATCTGCAT 28956 >seq1590 Length=2191 Score = 114 bits (126), Expect = 3e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| | ||||| ||||| || | ||| ||||| |||||| Sbjct 151 TCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAG 210 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| || || || ||||| ||||| || |||||||| ||| || ||||| Sbjct 211 ATCAGGCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTTC 270 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || |||||||| || || ||||| || || || ||||| || Sbjct 271 TCGATGGTGTCGGATGACTCCACTTCGAGGGTAATGGTCTTTCCCGTGAGGGTCTTCTCG 330 Query 288463 AATATCTGCATTATGT 288478 || || |||||| ||| Sbjct 331 AAAATTTGCATTGTGT 346 >seq629 Length=7623 Score = 114 bits (126), Expect = 3e-20 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || ||||| ||||| ||||| || | || || || |||||| Sbjct 3927 TCCTTCTGGATGTTGTAATCAGCGAGAGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAG 3868 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||| || || ||| || ||||| || |||||||| ||| |||||| Sbjct 3867 ATCAAACGCTGCTGG---TCGGGGGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTCACG 3811 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || || || || || ||||| ||||| || || || |||||| Sbjct 3810 TTCTCGATGGTGTCAGAAGACTCGACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTG 3751 Query 288460 ACGAATATCTGCATTATGTT 288479 ||||| || |||||| |||| Sbjct 3750 ACGAAAATTTGCATTGTGTT 3731 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| || ||||| ||||| || | || || || |||||| Sbjct 4155 TCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 4096 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||||| || | || || || || || ||||| || ||| || || ||| Sbjct 4095 ATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGAATCTTCTGCTTGACATTT 4036 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || ||||| || || || ||||| ||||| || || || ||||||||| Sbjct 4035 TCAATGGTGTCAGAGGATTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACG 3976 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 3975 AAGATCTGCAT 3965 >seq14642 Length=99085 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || | |||||| | ||| ||| | || | ||| || || |||||| Sbjct 59125 TCCTTCTGGATGTTGTGGTCGGCCAAGAAGCGGCCGGCCTCCAGTTGCTTGCCGGCGAAG 59184 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| || || || ||||| ||||| || || ||||| ||| ||| |||||| Sbjct 59185 ATCAGGCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCGTGGATCTTCTGTTTGACGTTT 59244 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || ||| || || ||||| ||||| ||||| ||||||| ||||||||| Sbjct 59245 TCAATGGTGTCAGACGACTCGACCTCGAGGGTGATGGTCTTTCCGGTCAAGGTCTTGACG 59304 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 59305 AAGATCTGCAT 59315 Score = 96.9 bits (106), Expect = 8e-15 Identities = 143/199 (72%), Gaps = 8/199 (4%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| | || || ||||| || | || || || || ||| Sbjct 59353 TCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAAG 59412 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTT 288401 || || ||||| || | || || ||||| || |||||||| ||| |||| ||||| Sbjct 59413 ATGAGGCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTTTGCTTG-ACGTT 59471 Query 288402 TTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || | ||| ||| || || ||||| ||||| ||||| || || || ||||| Sbjct 59472 CTCGATGGTGTCGGAGCTC---TCCACCTCGAGGGTGATGGTCTTTCCCGTGAGGGTCTT 59528 Query 288459 GACGAATATCTGCATTATG 288477 |||||| || |||||| || Sbjct 59529 GACGAAGATTTGCATTGTG 59547 >seq5612 Length=1165 Score = 111 bits (122), Expect = 4e-19 Identities = 168/235 (71%), Gaps = 3/235 (1%) Strand=Plus/Plus Query 288240 TACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATA 288299 |||| |||| || || || | ||| || | || | ||| || || ||||| || || Sbjct 783 TACA-GTCCGCCACGAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTA 841 Query 288300 GTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGA 288359 |||||| | || || ||||| || | || || || |||||||||| ||||| || Sbjct 842 GTCGGCCAAGGTACGACCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTC 901 Query 288360 ATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| ||||| || || ||||| ||| |||| |||||| || |||| ||| | Sbjct 902 GGGAGGGATACCTTCCTTGTCTTGGATCTTTTGCTT-CACGTTCTCGATAGTATCAGAAG 960 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || || ||||| || || || ||||| ||||||||||| |||||||| Sbjct 961 ACTCGACCTCAAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 1015 >seq5330 Length=1214 Score = 104 bits (114), Expect = 6e-17 Identities = 138/189 (73%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 288290 GGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC 288349 ||||||| || || || || ||| | ||||| || | || || || ||| ||||||| | Sbjct 684 GGATATTGTAATCAGCTAGAGTGTGGCCGTCCTCCAGCTGCTTGCCCGCGGAGATCAGTC 743 Query 288350 GCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATA 288408 | || ||| ||||| || || || || ||||| ||| |||| |||||| || ||| Sbjct 744 GTTGCTGATTGGGAGGGATGCCCTCCTTGTCTTGGATCTTTTGCTT-CACGTTCTCGATA 802 Query 288409 GAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATC 288468 | |||| || || || || || ||||| ||||| || || || ||||||||||| || Sbjct 803 GTATCGGAAGACTCGACCTCAAGAGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAAATT 862 Query 288469 TGCATTATG 288477 |||||| || Sbjct 863 TGCATTTTG 871 Score = 95.1 bits (104), Expect = 3e-14 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||| ||| || ||||| ||||| || | || || || |||||| Sbjct 450 TCCTTCTGGATGTTGTAGTAGGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAG 509 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTT 288401 || |||||||| || ||| | || || ||||||||||| ||| || |||||||| Sbjct 510 ATGAGACGCTGCTGGTCGGGAGGGCTGCCATCCTTATCCTGGATCTTTTGC-TTCACGTT 568 Query 288402 TTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || | || |||| ||| || || | || || ||||| || ||||||||||| Sbjct 569 CTCGATGGTGTCCGAGCTC--TTC-ACCTCCAAGGTAATTGTCTTGCCAGTCAGAGTCTT 625 Query 288459 GACGAATATCTGCATT 288474 ||| | |||||||| Sbjct 626 AACGTAGTTCTGCATT 641 >seq4150 Length=1450 Score = 104 bits (114), Expect = 6e-17 Identities = 143/199 (72%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| || || || ||||| || | || || || |||||| Sbjct 25 TCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCCAGCTGCTTGCCCGCGAAG 84 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| || || ||| || ||| || || || || |||||||| ||| |||||| Sbjct 85 ATCAAGCGTTGCTGA---TCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACG 141 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || || || || || ||||| ||||| || || || |||||| Sbjct 142 TTCTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTG 201 Query 288460 ACGAATATCTGCATTATGT 288478 ||||| || |||||| ||| Sbjct 202 ACGAAGATTTGCATTGTGT 220 >seq1075 Length=2391 Score = 100 bits (110), Expect = 7e-16 Identities = 145/202 (72%), Gaps = 12/202 (6%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| || ||||| ||||| || | || || || || ||| Sbjct 1411 TCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAG 1352 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || ||||| || || ||| || || || || |||||||| ||| || ||| Sbjct 1351 ATGAGGCGCTGCTGG---TCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTGACG 1295 Query 288400 TTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| ||| || || || || ||||| ||||| ||||| || ||| Sbjct 1294 TTCTCGATGGTGTCGGAGCTC---TCCACCTCCAGAGTGATGGTCTTGCCGGTGAGGGTC 1238 Query 288457 TTGACGAATATCTGCATTATGT 288478 |||||||| || |||||| ||| Sbjct 1237 TTGACGAAAATTTGCATTGTGT 1216 >seq11709 Length=580 Score = 95.1 bits (104), Expect = 3e-14 Identities = 164/233 (70%), Gaps = 13/233 (6%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | || | || || || ||||| || |||||||| Sbjct 216 CCACCGCGGAGACGGAGGACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCC 275 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | ||||| || ||||||||||| || || || || ||| Sbjct 276 AGGGTGCGACCGTCCTCCAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTG---GTCGGGG 332 Query 288367 --ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || || ||||| ||| || || ||||| || || | || |||| Sbjct 333 GAATACCCTCCTTGTCTTGGATCTTTTGC-TTGACGTTCTCGATGGTGTCGGAGCTC--- 388 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | || || ||||| || |||| ||||||||||| |||||||| Sbjct 389 TCCACCTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 441 >seq2163 Length=1988 Score = 93.3 bits (102), Expect = 1e-13 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| ||||| || | ||| || | || | ||| || || ||||| || |||||||| Sbjct 233 TCCGCCGCGAAGGCGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 174 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | ||||| ||||| || | ||||| || |||||||||| ||||| || || || Sbjct 173 CCGGGTGCGGCCGTCCTCCAGCTGTTTGCCCGCGAAGATCAAGCGCTGCTGG---TCGGG 117 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC-GCTCGATT 288421 | || ||||| || | ||||| ||| |||||||| || || | || | || | Sbjct 116 GGGAATGCCTTCCTTGGCTTGGATCTTCTGCTTCACGTTCTCGATGGCGTCAGAGCGCTC 57 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| | ||||| || || |||| | ||||||||||| |||||||| Sbjct 56 C-ACTTCCCGGGTGATGGTTTTGCCGGCACGGGTCTTGACGAAGATCTGCAT 6 >seq1840 Length=2099 Score = 91.5 bits (100), Expect = 3e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | |||| || || || ||||| || |||||||| Sbjct 331 CCACCGCGGAGACGGAGGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCT 272 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || ||||| || || || || ||| Sbjct 271 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCGGGAGGG 212 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || |||||||| ||| |||||||| || || | || |||| || Sbjct 211 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCAGAGCTC---TCC 155 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| || || | ||||||||||| |||||||| Sbjct 154 ACCTCCAAGGTGATAGTCTTGCCAGTTAAGGTCTTGACGAAGATCTGCAT 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179432234580922