Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq14654 122 2e-22 >seq14654 Length=53260 Score = 122 bits (134), Expect = 2e-22 Identities = 347/524 (66%), Gaps = 12/524 (2%) Strand=Plus/Minus Query 243208 CTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAG 243267 || ||| |||||||||| | | | || | || | || || || | ||||| ||| Sbjct 48428 CTCTTCAACGCCATCGAGACCGTGCCTACCGTCCGAAAGAAAGCTGAGTGGGCCATCAAG 48369 Query 243268 TGGCTAGAA--CCCGGTAAATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAG 243325 ||| ||||| ||| | | |||||| | || ||||| |||| | ||| || || Sbjct 48368 TGGATAGAAAACCCCG--ACGGCTTTGCTCACCGGCTCGTGGCCTTCGC-TGCTGTGGAG 48312 Query 243326 GTATTCTGTTT-TCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATG 243384 | ||| ||| || || || ||||||||||||||| || ||| | ||| | ||| Sbjct 48311 GGCATCTTTTTCTCTGGTTCCTTTTGCGCCATCTTTTGGTTGAAGAAGAGAGGCCTTATG 48252 Query 243385 CCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTC 243444 ||||| || || | ||| ||| ||||| | ||||||||| | ||| | || Sbjct 48251 CCTGGACTTTGTTTCAGTAATGAGCAGATCAGCAGGGACGAGGGCATGCACTGTGACTTT 48192 Query 243445 GGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAA-ACG-GTCAAACAA- 243501 | || | || | | ||||||||| ||| | | | ||| | | | ||| Sbjct 48191 GCCTGCCTCCTCTACAATATGATCCAGAACAG---ACCCTCCAACGACGTGCCCACCAAG 48135 Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 || ||| | || ||||| || | |||||||| || | |||| | ||||| || Sbjct 48134 ATTATCGCTGAGGCAGTGGAGATTGAAAAGGAGTTTGTGAGCGAGTCCCTTCCAGTGAGG 48075 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || || ||||||||| | || |||||| | |||||||| || || || || |||||| | Sbjct 48074 CTCATCGGCATGAACGCCGAGCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTG 48015 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | | || || || | ||||| | |||||| | | |||||| |||| || |||||| Sbjct 48014 CTGGTGGCCCTCGGCTGCGAGAAGATCTACAACGCTACGAACCCGTTTGACTGGATGGAG 47955 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 ||||| || | |||| || || ||||| ||||| | ||| || Sbjct 47954 CTCATCTCCTTGGAAGGCAAGACCAACTTTTTCGAGAGGCGCGT 47911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102672293575650