Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 192 7e-44 seq14654 122 1e-22 seq182 98.7 1e-15 seq490 86.0 7e-12 >seq3 Length=147229 Score = 192 bits (212), Expect = 7e-44 Identities = 1152/1824 (63%), Gaps = 55/1824 (3%) Strand=Plus/Plus Query 113599 GAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAA 113658 |||||||||||| ||||| || | |||| |||||| || || | |||||||||| | Sbjct 142585 GAGGTAGTACATTCCCGTTTTCAATCCCTTCTTCCAAGCGTAAAAGTGCATCGAGGTGAG 142644 Query 113659 CTTGG-AGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGC 113717 ||||| | || || | || ||| | ||| | || ||| |||||||| || Sbjct 142645 CTTGGCAAAGGAGGGGGCCTTG-ATGTGCACGTTGAAGCTCTGGCTCTGATCGATAAACG 142703 Query 113718 GTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATT--TCCCACACAGTTCT 113775 || |||||||||||||| || |||| | | | || |||||||| || | Sbjct 142704 CCCCTCGATCCGCCGCCATGTCGATCAAGG--TACGTTGGGACACCTCCCACACGGTCTT 142761 Query 113776 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCC---GC 113832 ||| || |||||||| | || ||||| | | | ||| | ||||| || Sbjct 142762 GTACAGCTTCTTAATGTGTTCCGGGATGCAGGCAAGGTGTTGAACAGAGCCGTTGTGAGC 142821 Query 113833 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 113892 | |||| | | ||||| || ||| || || | ||| | || || | || Sbjct 142822 C---ACCAGTTGGTTCTTCAGCTCGGCGCTCCACAGGCCCAAGTTTCTCAGGTCTTGCAT 142878 Query 113893 GAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGG 113951 | || | ||||||| || || || || | | |||| | ||| ||||| |||| Sbjct 142879 CAAGTGGCTGTTGACAATGGTGAAGTCTCCAGCCAAGATGCGGCG-AGAGTAGATGTTGG 142937 Query 113952 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCA 114011 ||||| |||||||||||||||||||| || | ||| || | |||||||||||| |||| Sbjct 142938 AGGTGTAGGGCTCAAAGCACTCATTGTTGCCGAGGATCTGCGAGGTGGAGGCTGTAGGCA 142997 Query 114012 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGT 114071 |||| |||| | | |||||| | || || | ||| | || | ||| ||| || Sbjct 142998 TGGGAGCCACCAACAAGCTGTTCCTCAGGCCGTGCTCCTTGATCTTCTGCTTCAGGCCGG 143057 Query 114072 CCCAGTCGTAGTTGAGCT------TTGTCTCCCCCTGCCACATATCAAACTGGAGGATAC 114125 ||||||| |||| ||| | | || | ||| | |||||||| | || | Sbjct 143058 CCCAGTCCCAGTTCTGCTCCGAACGAGGCACCACTCCCCAGAGGTCAAACTGCAAGAGGC 143117 Query 114126 CTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAAT-TCG 114184 ||| | || || || | | | || ||| |||||||| || || |||| ||| Sbjct 143118 CTTTGCTTGCAGGACTGCCAGGATAGGACTGGTAGGGGCCCTC-ACGAGCGGCAATCTCG 143176 Query 114185 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTG 114244 | || || || ||| || || |||||||| || || | | Sbjct 143177 TTGGATGCTGTCAGCGCAGCGAAGTAAATGGTCTCAAAGATATCTCGGTTGAGGTCAGCA 143236 Query 114245 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 114304 ||||| | | || | | || || || | ||| || ||||| || ||||| ||| Sbjct 143237 GCCTCTTGGCTCTCCCAGGGGAAACGCATCATCAAAAAGACGTCCGCAAGGCCTTGCACA 143296 Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAA 114364 || | || || || ||||| | | || || || ||||| | |||||||| | Sbjct 143297 CCAATTCCGATGGGACGATGACGAAGGTTCGAGTTGCGAGCCTCGACAACGGGATAGTAG 143356 Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC-ATGAAGCTT 114423 || || || ||| | || || || ||||| ||||| | || | || | Sbjct 143357 TTGACGTCAATGACCTTGTTGAGGTTGCGAGTGACGACCTTAACCACCTCGAACAAACGG 143416 Query 114424 TTCGTAATCAAAACTG---CG-----AGTCT-CTTCATTG---ACATACTTAGGAAGGGC 114471 | || ||||| | | || |||| | || || ||| |||| ||||| || Sbjct 143417 CT-GTGGTCAAATCGGGCTCGGCCGCTGTCTGCGTCGATGGACACAAACTTGGGAAGAGC 143475 Query 114472 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 114531 || || || || || ||||||| || ||||| |||||||| || || ||||| Sbjct 143476 GAGAGAAGCGAGGTTGCACACAGCCACTTCGTCCTTGGAGGTGTACTCCATGATCTCCGT 143535 Query 114532 ACACAAAT---TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 114588 || | | |||||| ||||||||| | ||||| ||| || ||||| ||| || Sbjct 143536 GCAAAGGTTGCTTGAAC---GAATGGTGCCGAGGTTCTGTTGGTTGGACTTGCGGTTGCA 143592 Query 114589 CGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 114648 || |||||||| ||||| || ||||| || ||||| | ||| || || || || Sbjct 143593 CGAGTCCTTGTATAGCATATAGGGCGTGCCGGTCTCTATCTGGCTCTCCAGGATGGCGAA 143652 Query 114649 CCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708 ||||| || ||| || | ||||||| ||||||| ||||| ||||| Sbjct 143653 CCAGAGCTCTTGGGCCTTAACGCTCCTCCTGGCTCGGCCCTCCTGTTCGTATCGAGTGTA 143712 Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768 ||| || |||||||| || ||| | | || | | || || || | | || || || Sbjct 143713 GAGCGCCTCAAACTCCTCTCCCCAGACATCAGCCAAGCCGGGAGCTTCGTTGGGACAAAA 143772 Query 114769 GAGAGACCA---TTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAG 114825 || ||||| ||| | |||| || ||||||||||| ||||| || | |||||| Sbjct 143773 CAGGGACCACTCCTGATTGCTCTCC---ACTCGCTTCATGAATAGGTCCGGAACCCAGAG 143829 Query 114826 AGCTGAGAAGAGATCCCGACAGCG-AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 114884 || | ||||| || | ||| ||| || || | || || || || ||||| Sbjct 143830 CGCGTAAAAGAGGTCTCTGGCGCGCAGC-TCCTCCTTGCCGTGGTTCTTCTTCAGCTCCA 143888 Query 114885 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG-- 114942 ||| || | | ||||||||||| || |||| ||| || || | | || || || Sbjct 143889 GAAACTCGAAAACGTCCGCGTGCCATGGCTCCAAGTAGACAGCAAAAGCTCCTTTGCGTT 143948 Query 114943 -ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGA 115001 | || | |||| || || || || ||| | ||||| ||||||||||| || |||| Sbjct 143949 TGCCTCCTCCTTGGTCGACGTATCTGGCAGTGTCGTTAAAGACGCGAAGCATCGGGATGA 144008 Query 115002 TACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGA 115061 ||| | || |||||| || || || || | ||| | || || | Sbjct 144009 GACCGTTCGACGTGCCATTAGTTCCACGGATGTAGCTGTGCGAGGCACGGATTGTGTGTA 144068 Query 115062 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGT 115121 | | || || || || || ||| ||||| ||||| | | | || || ||| Sbjct 144069 CGCTGAGGCCGATGCCACCAGCGGCCTTGGAGATCAAGGCGCATTGCTTTAGGGTGTCGT 144128 Query 115122 AGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCC 115181 |||| || ||||| ||| || | | | || | |||||| || | ||| |||| Sbjct 144129 AGATGCCCTCGATGCTGTCCTCCCTCATCGTGAGCAAAAAGCAGGAAGAGAGTTGCGGCC 144188 Query 115182 TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA-CATACCTTGGGACATC 115240 ||| || ||||||||||| || || || ||||| | || | | || |||||| Sbjct 144189 GCTCTGTGCCGGCGTTGAAGAGAGTGGGGGTGGCGTGAGTAAAGTAGAGGTT-GGACATG 144247 Query 115241 TTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGC 115300 || ||||||||| | | | || | ||||||| || || || ||||| | || ||| Sbjct 144248 AGATTGTAGGTCTCAATGGCAGCAGCAATGTCTCCCATATGGATGCCGATGGCAACTCGC 144307 Query 115301 ATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTC 115360 || | ||||| ||| || | || | | | || || | | | |||||| ||| || Sbjct 144308 ATGATCATGTGTTGAGGCCTCTCAACGATCTTGCCCTCCACCTTGAAGAGGTAGCTCCTC 144367 Query 115361 TCCAAGGTCTTGAGACCAAAATAA 115384 ||||||||||| | ||||| ||| Sbjct 144368 TCCAAGGTCTTAAAGCCAAAGTAA 144391 >seq14654 Length=53260 Score = 122 bits (134), Expect = 1e-22 Identities = 359/546 (66%), Gaps = 23/546 (4%) Strand=Plus/Plus Query 125753 TTGCCGTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTC 125812 ||| | || || || || ||| ||||||| ||||| ||||| || |||||| ||| | Sbjct 47896 TTGGCATACTCTCCCACGCGCCTCTCGAAAAAGTTGGTCTTGCCTTCCAAGGAGATGAGC 47955 Query 125813 TCCATAAAATCAAATGGGTTCTTTGAGTTCCAAATTGT-TGGCACCCCAATCTGTTTGAG 125871 ||||| | ||||| |||||| | | ||| | || | | ||| || | || Sbjct 47956 TCCATCCAGTCAAACGGGTTCGTAGCGTTGTAGATCTTCTCGCAGCCGAGGGCCACC-AG 48014 Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931 || || |||| || |||||||||||| |||| ||| | |||||| |||||||| Sbjct 48015 CAGGCGGTCCGCCACAAACTCAATGTACTGGCACATGAGCTCGGCGTTCATGCCGATGAG 48074 Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991 | ||| || | || | ||| |||| ||||| ||||| || || |||| Sbjct 48075 CCTCACTGGAAGGGACTCGCTCACAAACTCCTTTTCAATCTCCACTGCCTCAG---CGAT 48131 Query 125992 GGCGTGAATGGTGTCCACCCCA------GGTCTATTGCGCAAAGTCTTGAAGAGTTCCAC 126045 | ||||| ||| | ||||| || | | | ||| |||| Sbjct 48132 AATCT---TGGTGGGCACGTCGTTGGAGGGTCTGTTCTGGATCATATTGTAGAGGAGGCA 48188 Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| | |||||||| | | ||| | ||||| ||| || ||||| Sbjct 48189 GGCAAAGTCACAGTGCATGCCCTCGTCCCTGCTGATCTGCTCATTACTGAAACAAAGTCC 48248 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| || || | |||||||||||| || || || ||||| ||||| ||||| ||||| Sbjct 48249 AGGCATAAGGCCTCTCTTCTTCAACCAAAAGATGGCGCAAAAGGAACCAGAGAAAAAGAT 48308 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA 126225 ||||||||| ||||| || | ||| || | ||||||| | | ||| || | Sbjct 48309 GCCCTCCACAGCAGCGAAGGCCACGAGCCGGTGAGCAAAGCCGTCGGGGTTT---TCTAT 48365 Query 126226 CCACTTCATCGCCCACTGCGCCTT-TTTC--TCGATACACGGGACGGTCTGGATCGCTTC 126282 |||||| || ||||||| || || |||| || || || ||||||| ||| || | Sbjct 48366 CCACTTGATGGCCCACTCAGCTTTCTTTCGGACGGTA---GGCACGGTCTCGATGGCGTT 48422 Query 126283 AAAGAG 126288 ||||| Sbjct 48423 GAAGAG 48428 >seq182 Length=84632 Score = 98.7 bits (108), Expect = 1e-15 Identities = 350/544 (64%), Gaps = 10/544 (2%) Strand=Plus/Minus Query 126080 ATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 126139 ||||| || || ||||| || || ||||| || || | ||||||| |||||| || Sbjct 22274 ATGAGCTCGTTGCTGAAGCTGAGCCCAGGCATCAGCCCTCTTTTCTTCAGCCAGAAGATG 22215 Query 126140 GCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACGCAAAGAGACGCTCA 126199 || || || || |||||||||||||| || ||||| || || |||| ||| ||| | Sbjct 22214 GCGCAGAAGGAGCCCGAGAAGAAGATGCCTTCCACTGCGGCAAAGGCAATGAGCCGCAGA 22155 Query 126200 GCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATA 126259 ||||| | | | |||| || | ||| || |||||| | ||||| |||| | Sbjct 22154 GCAAAAGCTTGTGGCTTT---TCTATCCAACGCAGCGCCCATTCGGCCTTCTTCTTCACG 22098 Query 126260 CACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTAC 126319 | || || |||| || || | |||||| | ||||||| ||||||| ||| Sbjct 22097 CTAGGCACCGTCTCAATGGCGTTAAAGAGCTTAGCCTTTTCTTTCACGTCTTTGACGTAG 22038 Query 126320 TTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCATTTCATTATGGC--ACTGATACG 126377 | || ||||| || || | || ||||| ||| ||||| ||| | Sbjct 22037 GTGTCGATGAGCAGCGAGTACATCTCCGAGTGGA--TGTTCTCCATGGCGATTTGAAAGC 21980 Query 126378 CGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCT 126437 ||||||| | || || || | || || || | || | | | |||| Sbjct 21979 CGTAGAAGCAACGTGCCTCCGGCAGTTGAACTTCCTTCATGAAGCGGGCAGCAAGGTTCT 21920 Query 126438 CAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTT 126497 | | || || ||||| || |||| ||||| |||| | | ||| || || | ||| Sbjct 21919 CCACCACGATGCCATCCGAGGCAGCGAAAAAGGCCAACACGTGCTTGATAAAGTGGCGTT 21860 Query 126498 CATTCTCGTTCAGGGTCT---TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCG 126554 | | ||| || | | |||||||| ||| |||| | || |||||||||||| Sbjct 21859 CGTCCTCCACAAGCTTGTGGCTCCAGTCGGTAAGGTCCTGCACCAGGTCTACCTCCTCCA 21800 Query 126555 CAGTCCAATTGCTCATTTGAGCCTTCTTATAGAGTTCCCAAAGGTGGGGATACTTCAGGG 126614 | |||||| ||| || |||||||| || | ||||||||||| | ||| |||| | Sbjct 21799 CCGTCCAAAAGCTAGCCTGGGCCTTCTTGTACATTTCCCAAAGGTTGTGATGGCTCAGCG 21740 Query 126615 GGAA 126618 |||| Sbjct 21739 GGAA 21736 >seq490 Length=6195 Score = 86.0 bits (94), Expect = 7e-12 Identities = 112/153 (73%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 172807 GAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGT 172866 ||||||| | || || || | || | |||| | |||||| ||||| ||||| | | Sbjct 3817 GAGAGGGTAAACTCCATAATTGTCTCTTCCAAGAATAGAAAGCCCAGCTACTGCCAAACT 3876 Query 172867 CTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCC--CC 172924 ||| || || || |||||||||| ||||| || || || | | || | |||| || Sbjct 3877 CTTTGCCGAGTCGCCCTCCGTCAAAATGAGGGTGCA--TTGCTGCGCGTTCGGTCCTCCC 3934 Query 172925 GCCTTGTTCGCATCGTCCAACTTGGGAATACCA 172957 || ||||| |||||||||||||| ||||||||| Sbjct 3935 GCATTGTTGGCATCGTCCAACTTTGGAATACCA 3967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597243843742920