Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq7184 140 4e-28 seq3021 140 4e-28 seq14642 134 1e-26 seq1075 134 1e-26 seq201 134 1e-26 seq629 132 5e-26 seq2450 123 3e-23 seq294 123 3e-23 seq4150 114 1e-20 seq104 114 1e-20 seq5330 113 5e-20 seq5612 111 2e-19 seq119 105 7e-18 >seq7184 Length=931 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | |||||||||||| || | ||| |||||| || || ||||| || ||| Sbjct 600 CCTCCCCTCAGACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 659 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | || || |||| || |||||||| ||||| || || || |||||||| |||| || Sbjct 660 AAGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGAGGG 719 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | || ||||||||| ||| ||||| |||| | | | ||||| |||||||| Sbjct 720 ATGCCTTCCTTGTCCTGGATCTTTTGCTTGACATTTTCAATAGTGTCAGAGGATTCCACT 779 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| ||||| || || ||||| || ||||| ||||| Sbjct 780 TCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 826 Score = 136 bits (150), Expect = 4e-27 Identities = 158/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| ||||||||| || ||||||||||||| || || |||| || Sbjct 162 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCAGCCAAGGTGCGGCCGTCCTCC 221 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || ||||| ||||| ||||||||||||| || | || |||||||||| | Sbjct 222 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 281 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 || ||||| || | || | | ||||| |||| ||||| || | |||||||| Sbjct 282 ATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTC---TCCACTTCCAGGGTGATGGTC 338 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || ||||| || ||||| ||||| Sbjct 339 TTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 370 Score = 129 bits (142), Expect = 6e-25 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | |||||||||||| || | ||| |||||| || || ||||| || || Sbjct 371 ACCTCCACGGAGACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGC 430 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || |||||||| || ||||| ||||| ||||||||||||| || Sbjct 431 CAAGGTACGACCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGG 490 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | || |||||||||| |||||| || || | || | | ||||| |||| || Sbjct 491 AATGCCCTCCTTGTCCTGGATTTTCTGCTTCACGTTCTCGATGGTGTCGGAGCTC---TC 547 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || | || ||||| ||||| || | ||||| || ||||| ||||| Sbjct 548 CACCTCCAAGGTAATGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 598 >seq3021 Length=1716 Score = 140 bits (154), Expect = 4e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 ||||||||||| || | ||| |||||| || || ||||| || |||| || || || Sbjct 1 CGCAACACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCG 60 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || |||||||| |||||||| || || |||||||| |||| || | | |||||| Sbjct 61 TCCTCCAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGATCGGGGGGGATTCCCTCCTTA 120 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 ||| ||| ||||| || | || | | |||||| || ||||| |||| ||||| Sbjct 121 TCCTGGATCTTTTGCTTCACATTCTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATA 180 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||||| || |||||||| || ||||| ||||| Sbjct 181 GTTTTGCCTGTGAGCGTCTTCACGAAGATCTGCAT 215 >seq14642 Length=99085 Score = 134 bits (148), Expect = 1e-26 Identities = 169/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | ||| | ||||| || | ||| |||||| || || ||||| || ||| Sbjct 59317 CCTCCCCTCAGACGAAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 59376 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | || || |||| || |||||||| || || || ||||| ||||||||||| | || Sbjct 59377 AAGGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCAGGGGGA 59436 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | || ||||||||| ||| ||||| |||| || | | ||||| |||| ||| Sbjct 59437 ATGCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTCTCGATGGTGTCGGAGCTC---TCC 59493 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || |||| |||||||| || ||||| || ||||| || |||||||||||| Sbjct 59494 ACCTCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAGATTTGCATT 59544 >seq1075 Length=2391 Score = 134 bits (148), Expect = 1e-26 Identities = 169/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | ||| | ||||| || | ||| |||||| || || ||||| || ||| Sbjct 1447 CCTCCCCTCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 1388 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || |||| || |||||||| || || || ||||| ||||||||||||| || Sbjct 1387 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGA 1328 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | || |||||||||| ||| || || |||| || | | ||||| |||| ||| Sbjct 1327 ATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTC---TCC 1271 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || | |||||||| ||||| || || ||||| || || ||||||||| Sbjct 1270 ACCTCCAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATTTGCATT 1220 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| |||||| || || ||||| || ||||| || || |||| || Sbjct 1657 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCC 1598 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || |||||||| ||||| || | |||||||||||||| || | | ||||||||| | Sbjct 1597 AGTTGCTTACCCGCGAAGATCAATCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCTTGG 1538 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 || ||||| || | || | | || || || || || || | |||||||||||| Sbjct 1537 ATCTTTTGCTTCACGTTCTCAATAGTATCAGAAGACTCGACCTCAAGAGTGATGGTTTTG 1478 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||| || ||||| ||||| Sbjct 1477 CCAGTCAAGGTCTTAACGAAGATCTGCAT 1449 >seq201 Length=21658 Score = 134 bits (148), Expect = 1e-26 Identities = 174/239 (73%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032 ||||| | || |||| ||||| | ||||| || | ||| |||||| || || ||| Sbjct 14232 ATTTAACAGCCACCTCGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTG 14173 Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092 |||||||| ||||| || | || || |||||||| || ||||| ||||| ||||||||| Sbjct 14172 TAATCAGCGAGAGTGCGGCCATCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGG 14113 Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---G 42149 |||| || | || ||||||||| ||| ||||| |||| || | | ||||| | Sbjct 14112 TCGGGGGGAATGCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTCTCGATGGTGTCAGAG 14053 Query 42150 CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || | || || || ||||| |||| ||||| || ||||| ||||| Sbjct 14052 CTC---TCCACCTCCAAGGTAATAGTCTTGCCAGTTAAGGTCTTGACGAAGATCTGCAT 13997 Score = 132 bits (146), Expect = 5e-26 Identities = 158/213 (74%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| ||||||||| || ||||| || ||||| || || |||| || Sbjct 13749 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCC 13690 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || ||||| || | ||||||||||||| || | || |||||||||| | Sbjct 13689 AGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGAGGTATGCCCTCCTTGTCCTGG 13630 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTT 42176 || || || |||| || | | |||||| ||| ||||| || | |||||||| Sbjct 13629 ATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTC---TCCACCTCAAGAGTGATGGTC 13573 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 ||||| || || ||||| || |||||||||||| Sbjct 13572 TTGCCAGTGAGGGTCTTCACGAAGATTTGCATT 13540 Score = 118 bits (130), Expect = 1e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | ||| | ||||| || | ||| |||||| || || ||||| || || Sbjct 13995 CCTCCCCTCAGACGAAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 13936 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || |||| || | |||||| |||||||| ||||| ||||||||||||| || Sbjct 13935 AGGGTGCGGCCGTCCTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 13876 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | || ||||||||| ||| || || |||| || | | ||||| |||| ||| Sbjct 13875 ATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTC---TCC 13819 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | || || || ||||| || || ||||| || ||||| ||||| Sbjct 13818 ACTTCCAGGGTAATAGTCTTGCCGGTAAGAGTCTTGACGAAGATCTGCAT 13769 >seq629 Length=7623 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | ||| | ||||| || | ||| |||||| || || ||||||||||| Sbjct 3963 CCTCCTCTAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCG 3904 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || |||| || |||||||| || ||||| || | ||||||||||||| || Sbjct 3903 AGAGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGA 3844 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | || ||||||||| ||| || || || | || | | ||||| || || || Sbjct 3843 ATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCAGAAGACTCGACC 3784 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | |||||||| ||||| || || ||||| || || ||||||||| Sbjct 3783 TCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCATT 3736 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||| ||||| || | ||| |||||| || || ||||| || ||||| || || | Sbjct 4180 ACGCAAGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCC 4121 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || |||||||| || ||||| || | ||||||||||| | || | | |||||| Sbjct 4120 GTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTT 4061 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 |||| || || || |||| | | | ||||| |||||||| || | ||||| Sbjct 4060 GTCCTGAATCTTCTGCTTGACATTTTCAATGGTGTCAGAGGATTCCACCTCCAGGGTGAT 4001 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || || ||||| || ||||| ||||| Sbjct 4000 GGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 3965 >seq2450 Length=1890 Score = 123 bits (136), Expect = 3e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 ||||| |||| ||||| || |||||||| || || ||||| || ||||| || ||| | Sbjct 795 CGCAAAACCATATGCAGAGTACTCTCCTTCTGGATGTTGTAGTCCGCCAGGGTTCGCCCC 854 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 | || |||||| | || || || ||||| || |||||||||| || | || ||||||| Sbjct 855 ACCTCCAGCTGCCTGCCGGCAAAGATGAGGCGTTGCTGGTCGGGAGGGATGCCCTCCTTG 914 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 ||| || ||||| ||| | | | | ||| | || || || || | |||||| Sbjct 915 TCCTGTATCTTTTGCATGACCTCGGAGAGCTCGTCCATGGACTCTACCTCAAGGGTGATG 974 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || || ||||| || ||||| || ||||||||||||| Sbjct 975 GTCTTTCCCGTGAGGGTCTTGACGTAGATTTGCATTTT 1012 >seq294 Length=52215 Score = 123 bits (136), Expect = 3e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||||||||||||||| || || || |||| || || ||||| || ||||| Sbjct 28993 CTCCTTCTGAATATTGTAATCAGCGAGGGTACGGCCGTCCTCCAGTTGCTTGCCGGCGAA 29052 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | ||||||||||| | || | | |||||||||| ||| || || || | | Sbjct 29053 GATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 29112 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| || ||||| |||| |||||||| || ||||| || ||||| || Sbjct 29113 CTCGATGGTGTCCGAGGACTCCACTTCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGAC 29172 Query 42197 AAAGATTTGCATT 42209 || ||||||||| Sbjct 29173 GAAAATTTGCATT 29185 >seq4150 Length=1450 Score = 114 bits (126), Expect = 1e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || ||||| || || |||| || |||||||| || ||||| Sbjct 24 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCCAGCTGCTTGCCCGCGAA 83 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | || ||||| |||| || | || |||||||||| ||| || || || | | Sbjct 84 GATCAAGCGTTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTT 143 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| || ||||| || | |||||||| ||||| || || ||||| || Sbjct 144 CTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 203 Query 42197 AAAGATTTGCATT 42209 |||||||||||| Sbjct 204 GAAGATTTGCATT 216 >seq104 Length=38954 Score = 114 bits (126), Expect = 1e-20 Identities = 154/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| ||||||||| || ||||| || |||| || || |||| || Sbjct 26217 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCC 26276 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || ||||| || || ||||||||||| | || | || ||||||||| | Sbjct 26277 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 26336 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 || ||||| || | || | | ||||| |||| ||||| || | ||||| || Sbjct 26337 ATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTC---TCCACCTCCAAAGTGATTGTC 26393 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || || || ||||| || |||||||||||| Sbjct 26394 TTACCAGTGAGGGTCTTGACGAAGATTTGCATT 26426 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| || | ||| | ||||| || | ||| |||||| || || ||||| || ||| Sbjct 25971 CCTCCCCTAAGACGAAGAACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 26030 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || |||||||| |||||||| || | ||||||||||||| || Sbjct 26031 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGAGGA 26090 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | || ||||| || ||| || || || | | | | ||||| || || || Sbjct 26091 ATGCCTTCCTTATCTTGGATCTTCTGCTTTACGTTTTCGATGGTGTCAGAAGACTCGACC 26150 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| || || || | ||||| || ||||| ||||| Sbjct 26151 TCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 26197 >seq5330 Length=1214 Score = 113 bits (124), Expect = 5e-20 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| | |||||||||||||| ||||| | |||| || |||||||| || ||| | Sbjct 676 CTCCTTCAGGATATTGTAATCAGCTAGAGTGTGGCCGTCCTCCAGCTGCTTGCCCGCGGA 735 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || ||||| ||||| | || || | || ||||||||| ||| ||||| || | | Sbjct 736 GATCAGTCGTTGCTGATTGGGAGGGATGCCCTCCTTGTCTTGGATCTTTTGCTTCACGTT 795 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | || ||| || || || || | |||||||| || ||||| || ||||| || Sbjct 796 CTCGATAGTATCGGAAGACTCGACCTCAAGAGTGATGGTCTTTCCCGTGAGGGTCTTGAC 855 Query 42197 AAAGATTTGCATTTT 42211 || ||||||||||| Sbjct 856 GAAAATTTGCATTTT 870 Score = 93.3 bits (102), Expect = 5e-14 Identities = 139/196 (71%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| | ||||| || || |||| || |||||||| |||||||| Sbjct 449 CTCCTTCTGGATGTTGTAGTAGGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAA 508 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||||| || || ||||| ||| ||| ||||| || | | Sbjct 509 GATGAGACGCTGCTGGTCGGGAGGGCTGCCATCCTTATCCTGGATCTTTTGCTTCACGTT 568 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | ||||| |||| | ||| || | || || || ||||| || || ||||| Sbjct 569 CTCGATGGTGTCCGAGCTC---TTCACCTCCAAGGTAATTGTCTTGCCAGTCAGAGTCTT 625 Query 42194 TACAAAGATTTGCATT 42209 || || | |||||| Sbjct 626 AACGTAGTTCTGCATT 641 >seq5612 Length=1165 Score = 111 bits (122), Expect = 2e-19 Identities = 169/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 41968 TATTAATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAA 42027 |||| ||||| | || || | | ||| | ||||| || | ||| |||||| || | Sbjct 775 TATTTATTTACAGTCCGCCACGAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGA 834 Query 42028 TATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCT 42087 | ||||| || |||| || || |||| || |||||||| |||||||| || | |||| Sbjct 835 TGTTGTAGTCGGCCAAGGTACGACCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAGCGCT 894 Query 42088 GCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGT 42147 ||||||||| || | | |||||||| ||| ||||| || | || | | || | Sbjct 895 GCTGGTCGGGAGGGATACCTTCCTTGTCTTGGATCTTTTGCTTCACGTTCTCGATAGTAT 954 Query 42148 CGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCA 42207 | || || || || | |||||||||||||| || || ||||| || ||||| |||| Sbjct 955 CAGAAGACTCGACCTCAAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCA 1014 Query 42208 T 42208 | Sbjct 1015 T 1015 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || | ||| | |||| || | ||| ||||||||| || ||||| || || Sbjct 1016 ACCTCCCCTCAGACGAAGGACCAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGC 1075 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || |||| || |||||||| || ||||| ||||| ||||||||||||| || Sbjct 1076 CAAGGTGCGGCCGTCCTCCAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGG 1135 Query 42101 CACGCTCTCCTTGTC 42115 | || |||||| || Sbjct 1136 AATGCCCTCCTTATC 1150 >seq119 Length=72801 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||| || | ||||||||||| ||||||||||| || ||||| |||| | |||| || Sbjct 21719 CACCAGGTGAATGGTGCTCTCCTTCTGAATATTGTAGTCGGCCAGGGTCCTCCCGTCTTC 21660 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 |||||| | || || || ||||| || || ||||||| || | || |||||||||| Sbjct 21659 CAGCTGCATGCCGGCAAAGATGAGGCGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTG 21600 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 ||||| | |||| | | | | |||||| | ||||| || || | ||| || Sbjct 21599 TATTTTCAGCTTGACCACCTCGATGGTGTCGGAGGGGTCCACGGAGAGGGTTACGGTCTT 21540 Query 42179 GCCCGTTAGCGTCTTTACAAAGA 42201 ||| || || ||||| | |||| Sbjct 21539 GCCGGTGAGGGTCTTGGCGAAGA 21517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543112991438160