Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3 302 4e-77 >seq3 Length=147229 Score = 302 bits (334), Expect = 4e-77 Identities = 986/1505 (66%), Gaps = 64/1505 (4%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||||||| || || |||||||| || || | ||| || | ||||| || || || Sbjct 144222 GCCACCCCCACTCTCTTCAACGCCGGCACAGAGCGGCCGCAACTCTCTTCCTGCTTTTTG 144163 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | |||| | || ||| |||| || || | ||||| ||| ||| | || || Sbjct 144162 CTCACGATGAGGGAGGACAGCATCGAGGGCATCTACGACACCCTAAAGCAATGCGCCTTG 144103 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||||| || ||| || || ||||| |||| || ||| | |||||| | | Sbjct 144102 ATCTCCAAGGCCGCTGGTGGCATCGGCCTCAGCGTACACACAATCCGTGCCTCGCACAGC 144043 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||||| || || |||||||| || ||||| ||| |||| ||||| || ||||| ||| Sbjct 144042 TACATCCGTGGAACTAATGGCACGTCGAACGGTCTCATCCCGATGCTTCGCGTCTTTAAC 143983 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 || | || | ||||| ||||| || || || | | || || |||| || ||||| Sbjct 143982 GACACTGCCAGATACGTCGACCAAGGAGGAGGCAAACGCAAAGGAGCTTTTGCTGTCTAC 143923 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 | ||||| |||||||||||||| | || | || ||| |||||||||||||| Sbjct 143922 TTGGAGCCATGGCACGCGGACGTTTTCGAGTTTCTGGAGCTGAAGAAGAACCACGGCAAG 143863 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | | | |||||||||||||| ||||| |||||||| || ||||| || ||||| Sbjct 143862 GAGGAGCTGCGCGCCAGAGACCTCTTTTACGCGCTCTGGGTTCCGGACCTATTCATGAAG 143803 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || || |||| || | ||| || ||||||||||| ||| |||||| || | Sbjct 143802 CGAGTGGAGAGCAATCAGGAGTGGTCCCTGTTTTGTCCCAACGAAGCTCCCGGCTTGGCT 143743 Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431 || || || ||| | ||||| | | || |||| |||||| | ||||| ||| Sbjct 143742 GATGTCTGGGGAGAGGAGTTTGAGGCGCTCTACACTCGATACGAACAGGAGGGCCGAGCC 143683 Query 94432 AGGAAG---GTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488 |||| | |||| || | || |||| ||| ||| |||| ||| | ||| Sbjct 143682 AGGAGGAGCGTTAAGG-CCCAAG--AGCTCTGGTTCGCCATCCTGGAGAGCCAGATAGAG 143626 Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548 || || |||||||| || | | ||||||||| |||| |||||||||||| ||| || Sbjct 143625 ACCGGCACGCCCTATATGCTATACAAGGACTCGTGCAACCGCAAGTCCAACCAACAGAAC 143566 Query 94549 CTCGGGGTGATCAAGAGCTC---GAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCG 94605 ||||| | || | || || || ||||| ||||| | ||||| || || | Sbjct 143565 CTCGG---CACCATTCGTTCAAGCAACCTTTGCACGGAGATCATGGAGTACACCTCCAAG 143509 Query 94606 GACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTG-CGA--GAT 94662 ||||| | |||||||| ||||| | || || || ||| || ||| | | || Sbjct 143508 GACGAAGTGGCTGTGTGCAACCTCGCTTCTCTCGCTCTTCCCAAGTTTGTGTCCATCGAC 143449 Query 94663 GCCTACACGTCTACTGCTTCGTTCGATCTG----GAGGAGCTTGTGAACTTCGCGG---- 94714 || ||| | || | |||| || || | ||| |||| || Sbjct 143448 GCAGACA-----GCGGCCGAGCCCGATTTGACCACAGCCGTTTG-----TTCGAGGTGGT 143399 Query 94715 GAAGGATGGT--CTTG-AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGG 94771 |||| | || || | ||||| |||| ||| || ||| |||| ||| ||||| | Sbjct 143398 TAAGG-TCGTCACTCGCAACCTCAACAAGGTCATTGACGTCAACTACTATCCCGTTGTCG 143340 Query 94772 AGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGG 94831 |||| ||||| ||||| ||||| |||||||| || || || || || | |||| Sbjct 143339 AGGCTCGCAACTCGAACCTTCGTCATCGTCCCATCGGAATTGGTGTGCAAGGCCTTGCGG 143280 Query 94832 ACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGA 94891 ||| | ||||||||||| | |||| || || || || | | || Sbjct 143279 ACGTCTTTTTGATGATGCGTTTCCCCTGGGAGAGCCAAGAGGCTGCTGACCTCAACCGAG 143220 Query 94892 ACATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCG- 94950 | || || || | |||||| | || || ||| | |||| | | | ||| | ||| Sbjct 143219 ATATCTTTGAGACCATTTACTTCGCTGCGCTGACAGCATCCAACGAGATTGCC-GCTCGT 143161 Query 94951 GACGGCGGGCCACACGAATCGT-TCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGT 95008 || ||| || || | || | ||| | | | ||| | | | ||| | || |||| Sbjct 143160 GAGGGC---CCCTACCAGTCCTATCCTGGCA--GTCCTGCAAGCAAAGGCCTCTTGCAGT 143106 Query 95009 TCGACCTCTGGGGTGTGAAGCC---CTCGGGTCTGTAC---GACTGGGAAGCTCTACGCG 95062 | ||||||||||| ||| ||| |||| | | || ||||||| | || | Sbjct 143105 TTGACCTCTGGGGAGTGGTGCCTCGTTCGGAGCAGAACTGGGACTGGGCCGGCCT-GAAG 143047 Query 95063 CTGATGTTATCA---AACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGG 95119 | || | |||| | ||||| ||| ||| || | ||||| |||||||| || | Sbjct 143046 CAGAAG--ATCAAGGAGCACGGCCTGAGGAACAGCTTGTTGGTGGCTCCCATGCCTACAG 142989 Query 95120 CCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGT 95179 ||||||| |||||||||| |||||||| |||| || || |||| |||||||||| | | Sbjct 142988 CCTCCACCTCGCAGATCCTCGGCAACAATGAGTGCTTTGAGCCCTACACCTCCAACATCT 142929 Query 95180 ACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACC 95239 || | || | | || || || ||| || | |||||| ||| | | | |||| Sbjct 142928 ACTCTCGCCGCATCTTGGCTGGAGACTTCACCATTGTCAACAGCCACTTGATGCAAGACC 142869 Query 95240 TGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGC-CAACGGC 95298 ||| |||| ||||| | | | || | |||||||||||| | || | ||||||| Sbjct 142868 TGAGAAACTTGGGCCTGTGGAGCGCCGAGCTGAAGAACCAACTGGT-GGCTCACAACGGC 142810 Query 95299 TCCGTCCAGAACAT--CCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGT 95356 || || || || | || || || ||||| |||| ||| ||| ||||||||||||| Sbjct 142809 TCTGTTCAACACCTTGCCTGC--ATCCCGGAACACATTAAGAAGCTGTACAAGACCGTGT 142752 Query 95357 GGGAG 95361 ||||| Sbjct 142751 GGGAG 142747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494632300796040