Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq104 111 6e-19 >seq104 Length=38954 Score = 111 bits (122), Expect = 6e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||||| || || || |||||||| || || || ||| Sbjct 26197 ATGCAGATCTTCGTCAAGACCTTGACTGGAAAGACCATCACTCTTGAGGTCGAGTCTTCT 26138 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| ||| | || || || || |||||||||||||| |||||||| || || Sbjct 26137 GACACCATCGAAAACGTAAAGCAGAAGATCCAAGATAAGGAAGGCATTCCTCCCGACCAG 26078 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| || ||| | || || || || || ||||| | || |||| || || || Sbjct 26077 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGGCCGACTACAAC 26018 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || ||||| || Sbjct 26017 ATCCAGAAGGAGTCCACTCTCCACTTGGT 25989 Score = 93.3 bits (102), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||| || || ||||| ||||| || ||||| || ||| Sbjct 25969 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACTATCACTCTCGAGGTTGAGTCTTCT 25910 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | || || || || || || |||||||| ||||||||||| || Sbjct 25909 GACACTATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 25850 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| | || ||| | || || || || || || || | || ||||| || || || Sbjct 25849 CAACGCCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGGCGCACCTTGGCTGACTACAAC 25790 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || ||||| || Sbjct 25789 ATCCAGAAGGAGTCCACCCTCCACTTGGT 25761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975346311101492