Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq740 127 2e-23 seq128 102 6e-16 >seq740 Length=7008 Score = 127 bits (140), Expect = 2e-23 Identities = 115/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 518160 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 518219 ||| ||| || | ||| |||||||| | ||||||||| |||||||| || ||||| || Sbjct 5927 CTTCGTTCTTGTTAAGGCCATACGCCAGAGCAGCAGCCGTTGGTTCGTTGATAATCCTTT 5868 Query 518220 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 518279 ||| | |||||||||||| |||| ||||| ||||||||||| ||||| || || || | Sbjct 5867 CAACCTGAAGACCAGCAATCTTTCCGGCATCCTTAGTGGCTTGCCTTTGCGAGTCATTGA 5808 Query 518280 AATATGCAGGAACAGTAATAACGGC 518304 | || ||||||||||| || || || Sbjct 5807 AGTAGGCAGGAACAGTGATCACAGC 5783 >seq128 Length=25026 Score = 102 bits (112), Expect = 6e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 1078767 ATTATTCATCGTGACATTAAGCCATCAAATATTCTCATCGATGAAAATTGGAATGTCAAA 1078826 || || ||||||||| | ||| || || || | | || ||||| ||||| || ||| Sbjct 3910 ATCATCCATCGTGACTTGAAGAGCTCCAACCTTTTAGTTGACGAAAACTGGAACGTAAAA 3851 Query 1078827 ATTGCCGATTTTGGATTTGCTCGCATCAAAGAAGAGAACGCCATCATGACTCGTTGTGGT 1078886 || || || ||||| |||||||| ||| |||||| ||||| | ||||| |||||||| Sbjct 3850 ATAGCAGACTTTGGTTTTGCTCGTATCCGAGAAGAAAACGCAACAATGACACGTTGTGGC 3791 Query 1078887 ACTCCTTGTTGGAC 1078900 |||||||||||||| Sbjct 3790 ACTCCTTGTTGGAC 3777 Score = 100 bits (110), Expect = 2e-15 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 1065098 GATCCAATTATTATTCATCGTGACATTAAACCATCCAATATTCTAGTTGATGATAGTATG 1065157 || || ||||| || ||||||||| | || ||||| || ||||||| || | | Sbjct 3919 GAACCTATTATCATCCATCGTGACTTGAAGAGCTCCAACCTTTTAGTTGACGAAAACTGG 3860 Query 1065158 AATGTGAAAATTGCTGATTTTGGATTTGCACGTATCAAAGAGGAAAATTCCGTAATGACA 1065217 || || ||||| || || ||||| ||||| |||||| ||| ||||| | ||||||| Sbjct 3859 AACGTAAAAATAGCAGACTTTGGTTTTGCTCGTATCCGAGAAGAAAACGCAACAATGACA 3800 Query 1065218 CGTTGTGGAACTCCTTGTTGGAC 1065240 |||||||| |||||||||||||| Sbjct 3799 CGTTGTGGCACTCCTTGTTGGAC 3777 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 1088650 CATCGAGACATTAAGCCAGCAAACATTCTTGTTGATGAACATTTCAATGTCAAAATTGCC 1088709 ||||| ||| | ||| | ||| || | ||||| ||| | | || || ||||| || Sbjct 3904 CATCGTGACTTGAAGAGCTCCAACCTTTTAGTTGACGAAAACTGGAACGTAAAAATAGCA 3845 Query 1088710 GATTTTGGATTTGCTCGTATCAAAGAAGACAATACCACAATGACTCGTTGTGGTACTCCT 1088769 || ||||| |||||||||||| |||||| || | |||||||| |||||||| |||||| Sbjct 3844 GACTTTGGTTTTGCTCGTATCCGAGAAGAAAACGCAACAATGACACGTTGTGGCACTCCT 3785 Query 1088770 TGTTGGAC 1088777 |||||||| Sbjct 3784 TGTTGGAC 3777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780092987201494