Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 127 2e-24 seq14654 120 4e-22 seq182 118 1e-21 >seq3 Length=147229 Score = 127 bits (140), Expect = 2e-24 Identities = 288/428 (67%), Gaps = 14/428 (3%) Strand=Plus/Plus Query 109411 AGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGT 109470 || || ||||| |||||||| | || |||||| ||||| | ||||| || | ||| Sbjct 142586 AGGTAGTACATTCCCGTTTTCAATCCCTTCTTCCAAGCGTAAAAGTGCATCGAGGTGAGC 142645 Query 109471 TTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGA 109530 |||| || | || || || || ||| | ||| ||||||||| || Sbjct 142646 TTGGCAAAGGAGGGGGCCTTGATGTGCACGTTGAAGCTCTGGCTCTGATCGATAAACGCC 142705 Query 109531 CCACGATCAGCCGCCATGTCGATGA---TACACTTTTGGCTAATTTCCCAGACAGTCTTG 109587 || ||||| |||||||||||||| | ||| |||| | ||||| || |||||| Sbjct 142706 CCTCGATCCGCCGCCATGTCGATCAAGGTACG---TTGGGACACCTCCCACACGGTCTTG 142762 Query 109588 TACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACC---AGCC 109644 |||| ||||| || | || || ||| | | || ||||| |||||| |||| Sbjct 142763 TACAGCTTCTTAATGTGTTCCGGGATGCAGGCAAGGTGTTGAACAGAGCCGTTGTGAGCC 142822 Query 109645 TTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGT-CAAC 109703 |||| | | ||||| ||| ||| || || | ||| | || || | || | Sbjct 142823 ---ACCAGTTGGTTCTTCAGCTCGGCGCTCCACAGGCCCAAGTTTCTCAGGTCTTGCATC 142879 Query 109704 AAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGT 109763 ||| ||| |||||| | | || || ||||| | |||| || ||||||||| | Sbjct 142880 AAGTGGCT-GTTGACAATGGTGAAGTCTCCAGCCAAGATGCGGCGAGAGTAGATGTTGGA 142938 Query 109764 CGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCAT 109823 |||||||| || || |||||||||||||| ||||| || | ||||| ||||| ||||| Sbjct 142939 GGTGTAGGGCTCAAAGCACTCATTGTTGCCGAGGATCTGCGAGGTGGAGGCTGTAGGCAT 142998 Query 109824 GGGAGCCA 109831 |||||||| Sbjct 142999 GGGAGCCA 143006 >seq14654 Length=53260 Score = 120 bits (132), Expect = 4e-22 Identities = 121/155 (78%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 119533 GCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCAC 119592 ||||||||||||| |||||||||||||| || ||||| ||||| | |||||||||||| | Sbjct 48227 GCTCATTACTGAAACAAAGTCCAGGCATAAGGCCTCTCTTCTTCAACCAAAAGATGGCGC 48286 Query 119593 AAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAA 119652 |||| ||||| || ||||||||||||||| ||||| || | || || | ||||| Sbjct 48287 AAAAGGAACCAGAGAAAAAGATGCCCTCCACAGCAGCGAAGGCCACGAGCCGGTGAGCAA 48346 Query 119653 A-AGGTCGAGACTTGTCGAACCACTTGAGAGCCCA 119686 | |||| | || || | |||||||| ||||| Sbjct 48347 AGCCGTCG-GGGTTTTCTATCCACTTGATGGCCCA 48380 >seq182 Length=84632 Score = 118 bits (130), Expect = 1e-21 Identities = 255/379 (67%), Gaps = 2/379 (1%) Strand=Plus/Minus Query 119318 CAGAAGACGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTAT 119377 || ||| ||||| | ||| |||| ||||| | | |||| |||| |||||| || || Sbjct 22485 CATAAGCCGATCCGCCACAAACTCTATATACTGGCACATGAGCTCCGCATTCATGCCGAT 22426 Query 119378 GAGATTACACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCAC 119437 ||| | || |||| ||| | || | ||||||||| || |||||||| | Sbjct 22425 GAGTCGAACAGGAAGAGACTCGGAAACAAACTCCTTCTCGATGTCAACAGCTTCCGCAAT 22366 Query 119438 GATGGAGTGAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACAACTCTACG-G 119496 ||| | || | || | ||||||| || || | |||| | ||| | Sbjct 22365 GATCCGACGGATGATCTCCTCGGGCGGTTTGTCCCTTAACATGCCGAACAGCA-TACAAG 22307 Query 119497 CAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAG 119556 |||| || ||| | |||||||||| |||||||| || ||||||| || |||| Sbjct 22306 CAAAGTCACAATGCATGCCTTCATCCCTGCTTATGAGCTCGTTGCTGAAGCTGAGCCCAG 22247 Query 119557 GCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGC 119616 |||| || ||||||||||| ||||| |||||||| || || || || |||||||||| Sbjct 22246 GCATCAGCCCTCTTTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGC 22187 Query 119617 CCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAACCACT 119676 | ||||| ||| || || | || ||| |||||||| | | | ||| || | ||| Sbjct 22186 CTTCCACTGCGGCAAAGGCAATGAGCCGCAGAGCAAAAGCTTGTGGCTTTTCTATCCAAC 22127 Query 119677 TGAGAGCCCAGTTGGCCTT 119695 || ||||| | |||||| Sbjct 22126 GCAGCGCCCATTCGGCCTT 22108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588867783022200