Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 188 8e-43 >seq3 Length=147229 Score = 188 bits (208), Expect = 8e-43 Identities = 616/944 (65%), Gaps = 25/944 (3%) Strand=Plus/Plus Query 106448 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507 ||| |||| ||||| |||| || || | ||||| |||||| || ||||| ||| Sbjct 143459 ACAAACTTGGGAAGAGCGAGAGAAGCGAGGTTGCACACAGCCACTTCGTCCTTGGAGGTG 143518 Query 106508 TACTCTAAAATTTCTGTACACAAGTTG---GAACTCTTAATCGTCCCCAAATTCTTTTGG 106564 ||||| | || || || || | |||| |||| ||| || || | |||| |||| Sbjct 143519 TACTCCATGATCTCCGTGCAAAGGTTGCTTGAACG---AATGGTGCCGAGGTTCTGTTGG 143575 Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624 || ||| |||||||| |||||||| ||||| |||||||| || ||||| |||| Sbjct 143576 TTGGACTTGCGGTTGCACGAGTCCTTGTATAGCATATAGGGCGTGCCGGTCTCTATCTGG 143635 Query 106625 GACTTGAGAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCC 106684 || || || || ||| | || ||| || | |||| || |||||| Sbjct 143636 CTCTCCAGGATGGCGAACCAGAGCTCTTGGGCCTTAACGCTCCTCCTGGCTCGGCCCTCC 143695 Query 106685 GCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGT 106744 ||||| |||||||| || ||||||||||| ||| | || | | || || Sbjct 143696 TGTTCGTATCGAGTGTAGAGCGCCTCAAACTCCTCTCCCCAGACATCAGCCAAGCCGGGA 143755 Query 106745 GCCTTGTCTGGACAGAAAAGAGACCATT---GACCACCCTCCTCAACCCGCTTCATGAAA 106801 || | || ||||| || || ||||| | || | |||| || ||||||||||| Sbjct 143756 GCTTCGTTGGGACAAAACAGGGACCACTCCTGATTGCTCTCC---ACTCGCTTCATGAAT 143812 Query 106802 AGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGG 106861 ||||| |||| ||| || | ||||||| ||||| || ||| || | || ||| Sbjct 143813 AGGTCCGGAACCCAGAGCGCGTAAAAGAGGTCTCTGGCGCGCAGCTCCTCCTTGCCGTGG 143872 Query 106862 TTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGC 106920 || || | | ||| || ||||| | | ||||||||||||||||| | ||||| || Sbjct 143873 TT-CTTCTTCAGCTCCAGAAACTCGAAAACGTCCGCGTGCCATGGCTCCAAGTAGACAGC 143931 Query 106921 GATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977 | || ||| || || | || |||| | || || | || ||| ||||||| || Sbjct 143932 AAAAGCTCCTTTGCGTTTGCCTCCTCCTTGGTCGACGTATCTGGCAGTGTCGTTAAAGAC 143991 Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTAT 107036 ||||||||| || || | ||| | || ||||| || || || || || | | Sbjct 143992 GCGAAGCATCGGGATGAGACCGTTCGACGTGCCATTAGTTCCACGGAT-GTAGCTGTGCG 144050 Query 107037 TGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCAC 107096 ||| | | || | | | || || || ||||| ||| ||||| || | Sbjct 144051 AGGCACGGATTGTGTGTACGCTGAGGCCGATGCCACCAGCGGCCTTGGAGATCAAGGCGC 144110 Query 107097 ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGC 107156 | | | | || || | ||||| || | ||| ||||||| | | | || | |||| Sbjct 144111 ATTGCTTTAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCCTCATCGTGAGCAAAAAGC 144170 Query 107157 AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 107216 | || | ||||| | ||| || || |||||||| || || || |||||| | | Sbjct 144171 AGGAAGAGAGTTGCGGCCGCTCTGTGCCGGCGTTGAAGAGAGTGGGGGTGGCGTGAGTAA 144230 Query 107217 A-CATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 107275 | | | || |||||| | ||| ||||| | | ||| | |||||||| || ||| Sbjct 144231 AGTAGAGGTT-GGACATGAGATTGTAGGTCTCAATGGCAGCAGCAATGTCTCCCATATGG 144289 Query 107276 ATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGC 107335 ||||||||||| || ||||| | ||||| ||| || | || | || |||| || | Sbjct 144290 ATGCCGATGGCAACTCGCATGATCATGTGTTGAGGCCTCTCAACGATCTTGCCCTCCA-- 144347 Query 107336 CGTTGAAGA--TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTAA 107377 | ||||||| |||||| |||| | ||| || | ||||||||| Sbjct 144348 CCTTGAAGAGGTAGCTCCTCTCCAAGGTCTTAAAGCCAAAGTAA 144391 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 105894 TGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAG 105952 |||||||||| || ||||| || | | | | | ||| |||||||| | |||||| Sbjct 142887 TGTTGACAATGGTGAAGTCTCCAGCCAAGATGCGGCG-AGAGTAGATGTTGGAGGTGTAG 142945 Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 || |||||||| ||||| || || | ||| || | |||||||||||| ||||| || ||| Sbjct 142946 GGCTCAAAGCACTCATTGTTGCCGAGGATCTGCGAGGTGGAGGCTGTAGGCATGGGAGCC 143005 Query 106013 ATCAAAAGACTGTTACGAAGACCCTTTTCCTTGAT 106047 | ||| | ||||| | || || | |||||||| Sbjct 143006 ACCAACAAGCTGTTCCTCAGGCCGTGCTCCTTGAT 143040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589872398402760