Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq104 149 5e-31 seq629 127 2e-24 seq201 127 2e-24 seq6154 113 4e-20 seq5 113 4e-20 seq1840 109 4e-19 seq294 104 2e-17 seq14642 95.1 1e-14 seq2163 95.1 1e-14 seq5330 91.5 1e-13 >seq104 Length=38954 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || | ||| | ||| || || || || || || || || || ||||| ||||| Sbjct 25971 CCTCCCCTAAGACGAAGAACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 26030 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| |||| ||||| || || || ||||||||||| || ||||| ||| Sbjct 26031 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGAGGA 26090 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| |||||||| || || || ||||| |||| | |||||||| | || || Sbjct 26091 ATGCCTTCCTTATCTTGGATCTTCTGCTTTACGTTTTCGATGGTGTCAGAAGACTCGACC 26150 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||| || || || || || || || || || |||||||| Sbjct 26151 TCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCAT 26197 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||| ||||| | || || || ||||| || || || || || ||||| || || Sbjct 25743 CCACCTCGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 25802 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | || |||| ||||| || || || |||| || || || || || ||| Sbjct 25803 AAGGTGCGCCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGTTGCTGGTCAGGAGGA 25862 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || || || | || | ||||||||| | || || Sbjct 25863 ATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATAGTGTCAGAAGACTCAACC 25922 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||||||| || || ||||| || || || || || ||||||||| Sbjct 25923 TCGAGAGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCATG 25970 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || ||||| || ||||| ||||| | || | | | || ||| Sbjct 26217 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCC 26276 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || |||| ||||| || || || ||||||||||| || || || Sbjct 26277 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 26336 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || ||||| || || | || | ||||| || | ||||| || | ||||| || || Sbjct 26337 ATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACCTCCAAAGTGATTGTCTTA 26396 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || || | || || || || || ||||| || Sbjct 26397 CCAGTGAGGGTCTTGACGAAGATTTGCATTGT 26428 >seq629 Length=7623 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | ||| | || || || ||||| || || || || || |||||||| ||| Sbjct 3963 CCTCCTCTAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCG 3904 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | || |||| ||||| || || || ||||||||||| || ||||| ||| Sbjct 3903 AGAGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGA 3844 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || || || | || | |||||||| | || || Sbjct 3843 ATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCAGAAGACTCGACC 3784 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || ||||||| || ||||| || | || || || || || ||||| || Sbjct 3783 TCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCATTGT 3734 >seq201 Length=21658 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||| ||||| | || || || ||||| || || || || || |||||||| ||| Sbjct 14223 CCACCTCGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCG 14164 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| |||| ||||| || || || || | ||||| || ||||| ||| Sbjct 14163 AGAGTGCGGCCATCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 14104 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || ||||| || || | || | |||||||| | ||||| Sbjct 14103 ATGCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTCTCGATGGTGTCAGAGCTCTCCACC 14044 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | || | || ||||| ||||| || || || || ||||||||| Sbjct 14043 TCCAAGGTAATAGTCTTGCCAGTTAAGGTCTTGACGAAGATCTGCATG 13996 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || | ||| | ||| || || ||||| || || || || || ||||| |||||| Sbjct 13995 CCTCCCCTCAGACGAAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 13936 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | | || ||||| ||||| || || || || | ||||| || ||||| ||| Sbjct 13935 AGGGTGCGGCCGTCCTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 13876 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || || || | || | ||||| || | |||||| Sbjct 13875 ATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCACT 13816 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | || |||||||| | ||| || || || |||||||| Sbjct 13815 TCCAGGGTAATAGTCTTGCCGGTAAGAGTCTTGACGAAGATCTGCAT 13769 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || || || || ||||| || ||||| ||||| | || | | | || ||| Sbjct 13749 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCC 13690 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || ||||||||||| || ||||| || ||||| || || || || Sbjct 13689 AGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGAGGTATGCCCTCCTTGTCCTGG 13630 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || || | || | ||||| || | ||||| |||||||||| || ||| Sbjct 13629 ATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTG 13570 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || || | || || || || || ||||| || Sbjct 13569 CCAGTGAGGGTCTTCACGAAGATTTGCATTGT 13538 >seq6154 Length=1076 Score = 113 bits (124), Expect = 4e-20 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 101336 AATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACA 101395 || ||||||||||| || ||||| ||||||||||| || ||||| || |||||||| || Sbjct 1074 AAGATCAAACGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGGATCTTTTGTTTCACG 1015 Query 101396 ATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTT 101455 |||| | ||||| || | |||||||| || |||| |||||||| || || || || Sbjct 1014 TTTTCAATGGTGTCGGAGCTCTCCACTTCCAGGGTGATGGTTTTGCCAGTCAACGTCTTG 955 Query 101456 ACAAATATCTGCATG 101470 || || ||||||||| Sbjct 954 ACGAAGATCTGCATG 940 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || || ||||| || || || || || ||||| ||||| | || | | Sbjct 928 ACGAAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACC 869 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 || |||| ||||| || || || ||||| || || |||||||| ||||||||||| || Sbjct 868 GTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGGGGAATGCCTTCCTT 809 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || || || || || || || | || | ||||| || | ||||| || || |||| Sbjct 808 GTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGGACTCCACCTCCAGGGTGAT 749 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || || || || | || || || || || ||||| || Sbjct 748 GGTCTTTCCAGTGAGGGTCTTGACGAAAATTTGCATTGT 710 >seq5 Length=69586 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| ||||| || || || || ||||| ||||||| || | | | || ||| Sbjct 14163 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCC 14222 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || || || |||||||| || || || || ||||||||||| || || || Sbjct 14223 AGCTGCTTGCCGGCGAAGATCAAACGTTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGG 14282 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || || | || | ||||| || | |||||||| ||||||| || || Sbjct 14283 ATCTTCTGCTTCACGTTCTCGATGGTGTCCGAAGACTCCACTTCGAGAGTGATGGTCTTT 14342 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || || | || || || || || ||||| || Sbjct 14343 CCCGTGAGGGTCTTGACGAAAATTTGCATTGT 14374 >seq1840 Length=2099 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||||||||| || || || || ||||| ||||| | || | | |||| ||| Sbjct 313 ACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGGCCATCCTCC 254 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| || | || || || ||||| || || || || || || || Sbjct 253 AGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGG 194 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || || | || | |||||||| | ||||| || | |||| || ||| Sbjct 193 ATCTTCTGCTTCACGTTCTCGATGGTGTCAGAGCTCTCCACCTCCAAGGTGATAGTCTTG 134 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||||| || || || || ||||||||| Sbjct 133 CCAGTTAAGGTCTTGACGAAGATCTGCATG 104 >seq294 Length=52215 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || | ||| | || | || ||||| || || || || ||||||||||| ||| Sbjct 28958 CCTCCCCTCAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGAATATTGTAATCAGCG 29017 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | | || |||| |||||| || || || ||||| ||||| || || || ||| Sbjct 29018 AGGGTACGGCCGTCCTCCAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGGA 29077 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || || || || || || || || || | || | ||||| || | |||||| Sbjct 29078 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGGACTCCACT 29137 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || || |||| || || || || | || || || || || ||||| || Sbjct 29138 TCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAAATTTGCATTGT 29187 >seq14642 Length=99085 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || | ||| | || || || || || || || || || || ||||| ||||| Sbjct 59317 CCTCCCCTCAGACGAAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 59376 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | | || |||| ||||| || ||||| || | ||||| || || || ||| Sbjct 59377 AAGGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCAGGGGGA 59436 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || ||||| || || | || | ||||| || | ||||| Sbjct 59437 ATGCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCACC 59496 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || || |||| || || || || | || || || || || ||||| || Sbjct 59497 TCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAGATTTGCATTGT 59546 >seq2163 Length=1988 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || ||||| || || || || || ||||| ||||| || | | | || ||| Sbjct 214 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCCGGGTGCGGCCGTCCTCC 155 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | || || || || || ||||| ||||| || ||||| ||||||||||| || |||| Sbjct 154 AGCTGTTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGGGGAATGCCTTCCTTGGCTTGG 95 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || || | || | | |||||| |||||||| | |||| |||||| Sbjct 94 ATCTTCTGCTTCACGTTCTCGATGGCGTCAGAGCGCTCCACTTCCCGGGTGATGGTTTTG 35 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||| || || || || ||||||||| Sbjct 34 CCGGCACGGGTCTTGACGAAGATCTGCATG 5 >seq5330 Length=1214 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 101270 AGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTA 101329 |||||||| || || | ||||||||||| || | ||| | | || |||| ||||| Sbjct 668 AGGGTAGACTCCTTCAGGATATTGTAATCAGCTAGAGTGTGGCCGTCCTCCAGCTGCTTG 727 Query 101330 CCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGT 101389 || || | |||| || || |||| ||| || ||||| || || ||||| || ||||| Sbjct 728 CCCGCGGAGATCAGTCGTTGCTGATTGGGAGGGATGCCCTCCTTGTCTTGGATCTTTTGC 787 Query 101390 TTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAA 101449 || || | || | ||| || || | || || |||||||||| || || || || | Sbjct 788 TTCACGTTCTCGATAGTATCGGAAGACTCGACCTCAAGAGTGATGGTCTTTCCCGTGAGG 847 Query 101450 GTTTTTACAAATATCTGCAT 101469 || || || || || ||||| Sbjct 848 GTCTTGACGAAAATTTGCAT 867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396207409077543