Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq7184 105 5e-18 seq1075 100 2e-16 seq629 100 2e-16 seq6154 98.7 8e-16 seq294 98.7 8e-16 seq201 98.7 8e-16 seq3021 96.9 3e-15 seq11709 89.7 4e-13 seq5330 89.7 4e-13 seq119 89.7 4e-13 seq104 89.7 4e-13 >seq7184 Length=931 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || ||||||||||| || || ||| ||| || || || ||||| || | Sbjct 599 GCCTCCCCTCAGACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGC 658 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 | | || |||| |||| |||||| || ||||| ||||| ||||| ||||| | || Sbjct 659 CAAGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGAGG 718 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | ||| |||||||| |||||||| || ||| | | || || || | ||||| Sbjct 719 GATGCCTTCCTTGTCCTGGATCTTTTGCTTGACATTTTCAATAGTGTCAGAGGATTCCAC 778 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || || | || || || || |||||||| Sbjct 779 TTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 826 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || | ||||| || || ||| ||| ||||| || |||||||||| Sbjct 144 CCGCCACGAAGACGAAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCAGCC 203 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | || |||| |||| |||||| ||||| || || || ||||| || || | |||| Sbjct 204 AAGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGA 263 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||||| || || | | | || || |||||| Sbjct 264 ATGCCCTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACT 323 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || ||||| || | ||| || || || |||||||| Sbjct 324 TCCAGGGTGATGGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 370 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||||||||| || || ||| ||| || || || ||||| || | | | ||| Sbjct 381 AGACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGA 440 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| ||||| || || || ||||| || || | ||||| ||||||| Sbjct 441 CCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCC 500 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || || || || | | | || || ||||||||||| ||| Sbjct 501 TTGTCCTGGATTTTCTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTA 560 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || ||||| || || || || |||||||| Sbjct 561 ATGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 598 >seq1075 Length=2391 Score = 100 bits (110), Expect = 2e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || || | ||||| || || ||| ||| || || || ||||| || | Sbjct 1448 GCCTCCCCTCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 1389 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || |||| |||| |||||| |||||||| || || ||||| || || | ||| Sbjct 1388 CAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGG 1329 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || |||||||||||| ||||| || || || | | | || || |||||| Sbjct 1328 AATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCAC 1269 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTGT 48771 ||||| || || || || || || | || || || ||||| ||||| |||| Sbjct 1268 CTCCAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATTTGCATTGTGT 1216 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || | ||||| || || ||| ||| || || || ||||| || | Sbjct 1675 CCGCCACGAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 1616 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| |||| |||| |||||||| || || |||| |||||| || || | || Sbjct 1615 AGGGTGCGACCGTCCTCCAGTTGCTTACCCGCGAAGATCAATCGCTGCTGGTCGGGAGGG 1556 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| |||||||| || || | | || || || | ||| ||| Sbjct 1555 ATACCCTCCTTGTCTTGGATCTTTTGCTTCACGTTCTCAATAGTATCAGAAGACTCGACC 1496 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || ||||| || ||||| || || || || |||||||| Sbjct 1495 TCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 1449 >seq629 Length=7623 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 |||||| | || ||||| ||||| || || ||| ||| || || || ||||| || | Sbjct 4192 GCCGCCACGGAGACGCAAGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 4133 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || |||| |||| |||||| ||||| || |||| ||||| || || | ||| Sbjct 4132 CAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGG 4073 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || ||||||||||| |||||| || || ||| | | | || || | ||||| Sbjct 4072 AATACCCTCCTTGTCCTGAATCTTCTGCTTGACATTTTCAATGGTGTCAGAGGATTCCAC 4013 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || || || || || | || || || || |||||||| Sbjct 4012 CTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 3965 >seq6154 Length=1076 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||| || || || ||||| || | || | ||| |||| ||| Sbjct 921 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCC 862 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| ||||| || |||| || || ||||| | ||||| ||| |||||||| Sbjct 861 AGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGG 802 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || || | | | || || | ||||||||||| || || || ||| Sbjct 801 ATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGGACTCCACCTCCAGGGTGATGGTCTTT 742 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATCGTGT 48771 || || | || || || ||||| ||||| |||| Sbjct 741 CCAGTGAGGGTCTTGACGAAAATTTGCATTGTGT 708 >seq294 Length=52215 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || || | || | || || ||| ||| || |||||||||||||||| Sbjct 28957 GCCTCCCCTCAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGAATATTGTAATCAGC 29016 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || |||| |||| ||||| ||||| || |||| ||||| || || | ||| Sbjct 29017 GAGGGTACGGCCGTCCTCCAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGG 29076 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || ||||||||||| ||||| || || || | | | || || | |||||| Sbjct 29077 AATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGGACTCCAC 29136 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || | || || || |||||||| | || || || ||||| ||||| ||| Sbjct 29137 TTCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAAATTTGCATTGTG 29188 >seq201 Length=21658 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||| || || || |||||||||| ||| | || | || ||| Sbjct 14205 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCGAGAGTGCGGCCATCCTCC 14146 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || || || ||||| || || | ||||| ||| |||||||| Sbjct 14145 AGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGG 14086 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||||| || || | | | || || ||||||||||| ||||| || || Sbjct 14085 ATCTTTTGCTTGACGTTCTCGATGGTGTCAGAGCTCTCCACCTCCAAGGTAATAGTCTTG 14026 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || || || |||||||| Sbjct 14025 CCAGTTAAGGTCTTGACGAAGATCTGCAT 13997 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || || | ||||| || || ||| ||| || || || ||||| || | Sbjct 13996 GCCTCCCCTCAGACGAAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 13937 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || |||| ||||||||||| || || || || || ||||| || || | || Sbjct 13936 GAGGGTGCGGCCGTCCTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGG 13877 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || ||| |||||||| ||||| || || || | | | || || |||||| Sbjct 13876 AATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCAC 13817 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| || || || || | ||| || || || |||||||| Sbjct 13816 TTCCAGGGTAATAGTCTTGCCGGTAAGAGTCTTGACGAAGATCTGCAT 13769 >seq3021 Length=1716 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 ||||||||||| || || ||| ||| || || || ||||| || | | | || || Sbjct 1 CGCAACACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCG 60 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || |||| |||||| || || || ||||| ||||| ||||| | ||| | |||||||| Sbjct 61 TCCTCCAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGATCGGGGGGGATTCCCTCCTTA 120 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || |||||||| || ||| | | | || || | ||||||||| | || || Sbjct 121 TCCTGGATCTTTTGCTTCACATTCTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATA 180 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||||| || || | || || || || ||||||||| Sbjct 181 GTTTTGCCTGTGAGCGTCTTCACGAAGATCTGCATC 216 >seq11709 Length=580 Score = 89.7 bits (98), Expect = 4e-13 Identities = 146/209 (70%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || ||| || || || ||||| || | || | ||| |||| ||| Sbjct 234 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCC 293 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||| || ||||| || ||||| || || || || | ||||| ||||||||||| Sbjct 294 AGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGG-GGGAATACCCTCCTTGTCTTGG 352 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||||| || || | | | || || ||||||||||| ||||| || || Sbjct 353 ATCTTTTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTAATGGTCTTA 412 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || || || |||||||| Sbjct 413 CCAGTCAAGGTCTTGACGAAGATCTGCAT 441 >seq5330 Length=1214 Score = 89.7 bits (98), Expect = 4e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 48585 ATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGC 48644 ||||||||||||| |||| | | |||| |||| |||||| || || | |||||||| Sbjct 686 ATATTGTAATCAGCTAGAGTGTGGCCGTCCTCCAGCTGCTTGCCCGCGGAGATCAGTCGT 745 Query 48645 TGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGAC 48704 || |||| | || | |||||||||||| |||||||| || || | | || Sbjct 746 TGCTGATTGGGAGGGATGCCCTCCTTGTCTTGGATCTTTTGCTTCACGTTCTCGATAGTA 805 Query 48705 TCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGC 48764 || || | ||| ||||| | || || || |||||||| | || || || ||||| ||| Sbjct 806 TCGGAAGACTCGACCTCAAGAGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAAATTTGC 865 Query 48765 AT 48766 || Sbjct 866 AT 867 >seq119 Length=72801 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| |||| | ||||| || | |||||||| || ||||||||||| || | Sbjct 21736 CCTCCCCTCAGCCTTAGCACCAGGTGAATGGTGCTCTCCTTCTGAATATTGTAGTCGGCC 21677 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | | |||| |||| |||| | |||||||| || || || ||||| || | |||| Sbjct 21676 AGGGTCCTCCCGTCTTCCAGCTGCATGCCGGCAAAGATGAGGCGTTGTTGGTCGGGGGGA 21617 Query 48660 ACGCCCTCCTTGTC 48673 | |||||||||||| Sbjct 21616 ATGCCCTCCTTGTC 21603 >seq104 Length=38954 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||| ||||| || ||||| || | | | || |||| ||| Sbjct 26217 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCC 26276 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| ||||| || ||||| ||||| || || | ||||| ||| |||||||| Sbjct 26277 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 26336 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||||| || || | | | || || ||||||||||| || || || || Sbjct 26337 ATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACCTCCAAAGTGATTGTCTTA 26396 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATCGTGT 48771 || || | || || || || || ||||| |||| Sbjct 26397 CCAGTGAGGGTCTTGACGAAGATTTGCATTGTGT 26430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380869357290777