Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3 338 1e-87 seq14654 183 6e-41 seq182 181 2e-40 >seq3 Length=147229 Score = 338 bits (374), Expect = 1e-87 Identities = 992/1504 (66%), Gaps = 77/1504 (5%) Strand=Plus/Plus Query 212948 GTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCT 213007 ||| | ||| || ||||||||||| | || ||| ||||| || || ||||| | ||| Sbjct 142927 GTAGATGTTGGAGGTGTAGGGCTCAAAGCACTCATTGTTGCCGAGGATCTGCGAGGTGGA 142986 Query 213008 GGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCG 213067 |||||| |||||||||||||||| | |||||||||| |||||||| ||| | Sbjct 142987 GGCTGTAGGCATGGGAGCCACCAACAAGCTGTTCCTCAGGCCGTGCTCCTTGATCTTCTG 143046 Query 213068 CCGAAGCTCTGCCCAGTCCCA--TCTGC-CAGACAGGTCCTCGTCCTTCACGTTCCACAT 213124 | || | ||||||||||| ||||| | || | | | ||| ||| | Sbjct 143047 CTTCAGGCCGGCCCAGTCCCAGTTCTGCTCCGAACGAGGCAC------CACTCCCCAGAG 143100 Query 213125 GTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATG 213184 |||||||||||||| ||||||||| | || ||||| | || || ||||||||| | Sbjct 143101 GTCAAACTGCAAGAGGCCTTTGCTTGCAGGACTGCCAGGATAGGACTGGTAGGGGCCCTC 143160 Query 213185 CTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTC 213244 ||| | |||| ||| || ||| |||||| |||| ||||| ||||| || || Sbjct 143161 ACGAGCGGCAATCTCGTTGGATGCTGTCAGCGCAGCGAAGTAAATGGTCTCAAAGATATC 143220 Query 213245 CCTGTTGAGCTTCTTGGCCTCTGGGGAC------GTGAAGGGCATCATCATGCGTTGGAA 213298 | |||||| | |||||| || | | ||| ||||||||| || Sbjct 143221 TCGGTTGAGGTCAGCAGCCTCTTGGCTCTCCCAGGGGAAACGCATCATCAAA------AA 143274 Query 213299 CACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-G 213357 || || || || || || || || || |||||||| | || | ||||| || ||| | Sbjct 143275 GACGTCCGCAAGGCCTTGCACACCAATTCCGATGGGACGATGACGAAGGTTCGAGTTGCG 143334 Query 213358 AGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCA 213417 ||| ||| | | ||| || ||||| ||| |||| ||||||||||||||| ||| | | Sbjct 143335 AGC-CTCGACAACGGGATAGTAGTTGACGTCAATGACCTTGTTGAGGTTGCGAGTGACGA 143393 Query 213418 CTTTGGTGACATGGGCCA---------GGT--ACTCGTGATTGAACACGTAGCCCCCGTC 213466 | || || | | || ||| | ||| | | | | | | | |||| Sbjct 143394 CCTTAACCACCTCGAACAAACGGCTGTGGTCAAATCGGGCTCGGCCGCT--GTCTGCGTC 143451 Query 213467 C-TG--CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTC---CTG 213520 || |||||||| || || |||| || |||||||| || ||||| || || Sbjct 143452 GATGGACACAAACTTGGGAAGAGCGAGAGAAGCGAGGTTGCACACAGCCACTTCGTCCTT 143511 Query 213521 AGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTT 213580 ||| ||||||||||||||||| ||||| |||||||| | || |||||||| ||||| Sbjct 143512 GGAG---GTGTACTCCATGATCTCCGTGCAAAGGTTGCTTGAACGAATGGTGCCGAGGTT 143568 Query 213581 CTGGTGGTTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCT 213639 ||| ||||| ||| ||||| | ||| || |||||||| ||||| ||||| | ||||||| Sbjct 143569 CTGTTGGTTGGAC-TTGCGGTTGCACGAGTCCTTGTATAGCATATAGGGCGTGCCGGTCT 143627 Query 213640 CTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAG 213699 ||| |||| | |||| || | |||||| | |||||| || || |||| | Sbjct 143628 CTATCTGGCTCTCCAGGATGGCGAACCAGAGCTCTTGGGCCTTAACGCTCCTCCTG---G 143684 Query 213700 CTCCGGGCGTAGCC---TCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCC 213756 || ||| | | || ||||| | ||||||| | | || || | |||||||| Sbjct 143685 CT-CGGCCCT--CCTGTTCGTATCGAGTGTAGAGCGCCTCAAACTCCTCTCCCCAGACAT 143741 Query 213757 TGTCCAGTCCCGGACAGGATGC---GGGACACATGAGGCTCCAGTCCCCGTCAT--CTCT 213811 ||| || ||| | | | |||||| | ||| ||| ||| | || |||| Sbjct 143742 CAGCCAAGCCGGGA---GCTTCGTTGGGACAAAACAGGGACCACTCC---TGATTGCTCT 143795 Query 213812 -GACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCC 213870 |||| || |||||| |||||||| ||||| |||||| || ||||| |||| | | Sbjct 143796 CCACTCGCTTCATGAATAGGTCCGGAACCCAGAGCGCGTAAAAGAGGTCTCTGGCGCGCA 143855 Query 213871 TCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACG 213930 ||| ||| || ||| || ||| || ||||| || || | |||||||||||| | Sbjct 143856 GCTCCTCCTTGCCGTGGTTCTTCTTCAGCTCCAGAAACTCGAAAACGTCCGCGTGCCATG 143915 Query 213931 GCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGG 213987 |||||| ||||| ||||| || || | ||| || || ||||| || |||| Sbjct 143916 GCTCCAAGTAGACAGCAAAAGCTCCTTTGCGTTTGCCTCCTCCTTGGTCGACGTATCTGG 143975 Query 213988 CCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCG 214047 | ||| |||| ||| || | || | || ||||| ||| || || ||||| Sbjct 143976 CAGTGTCGTTAAAGACGCGAAGCATCGGGATGAGACCGTTCGACGTGCCATTAGTTCCAC 144035 Query 214048 CTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACT 214107 || || | ||||| | | || | | ||| || |||||||| ||| || Sbjct 144036 GGATGTAGCTGTGCGAGGCACGGATTGTGTGTACGCTGAGGCCGATGCCACCAGCGGCCT 144095 Query 214108 TGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGA 214167 ||||||||| |||||| || | | || || |||||| | |||||||| || | | Sbjct 144096 TGGAGATCAAGGCGCATTGCTTTAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCCTCA 144155 Query 214168 GGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGG 214227 | ||||| |||||| ||||| || |||| | ||| | |||||| || |||| Sbjct 144156 TCGTGAGCAAAAAGCAGGAAGAGAGTTGCGGCCGCTCTGTGCCGGCGTTGAAGAGAGTGG 144215 Query 214228 GGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGA 214287 || |||| || | | | ||| || | ||| |||||||||| | | | | | | Sbjct 144216 GGGTGGCGTGAGTAAAGTAGAGGTTGGACATGAGATTGTAGGTCTCAATGGCAGCAGCAA 144275 Query 214288 TGTCGTGCTTGTGGATCTGTAGAGCGCACCT--CATCAGCATGTGCTGGGGCCTCTCTAT 214345 |||| | | |||| || || ||| || ||| | |||||| || |||||||| | Sbjct 144276 TGTCTCCCATATGGA--TGCCGATGGCAACTCGCATGATCATGTGTTGAGGCCTCTC-AA 144332 Query 214346 GGGTCCTTTGGGGC-CCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGG 214404 | || | | |||||| |||||| | ||||| ||||| || |||||||| | Sbjct 144333 CGATCTTGCCCTCCACCTTGAAGAGGTAGCTCCTCTCCAAGGTCTTAAAGCCAAAGTAAG 144392 Query 214405 AGTA 214408 |||| Sbjct 144393 AGTA 144396 >seq14654 Length=53260 Score = 183 bits (202), Expect = 6e-41 Identities = 558/849 (66%), Gaps = 20/849 (2%) Strand=Plus/Plus Query 47843 TAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATG 47902 || || ||||| | |||| || ||||| ||||| || ||||| |||||| |||||| Sbjct 47902 TACTCTCCCACGCGCCTCTCGAAAAAGTTGGTCTTGCCTTCCAAGGAGATGAGCTCCATC 47961 Query 47903 AAGAGGAAGGGGTTGGGTGTGTTATACACCCG-TGTCAGGCCCATCTGTTCCAGCAGGTG 47961 || || ||||| | | ||| || | | | ||| || | |||||||| | Sbjct 47962 CAGTCAAACGGGTTCGTAGCGTTGTAGATCTTCTCGCAG-CCGAGGGCCACCAGCAGGCG 48020 Query 47962 ATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACAC 48021 ||||| || |||| ||||| | ||||||| | ||||||||| ||||| ||| Sbjct 48021 GTCCGCCACAAACTCAATGTACTGGCACATGAGCTCGGCGTTCATGCCGATGAGCCTCAC 48080 Query 48022 GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT 48081 || | | || | | ||||||||| || |||| ||| || || | | ||||| | Sbjct 48081 TGGAAGGGACTCGCTCACAAACTCCTTTTCAATCTCCACTGCCTCAGCGATAATCTTGGT 48140 Query 48082 AACGCGGGACTCTG-AGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGT 48140 || | | || ||||| |||| | | ||| ||||| | ||||||||||| Sbjct 48141 GG-GCACGTCGTTGGAGGGTCTGTTCTGGATCATATTG---TAGAGGAGGCAGGCAAAGT 48196 Query 48141 CCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGA 48200 | | ||||| ||| ||||||| |||||| || | || ||| || || |||||||| | Sbjct 48197 CACAGTGCATGCCCTCGTCCCTGCTGATCTGCTCATTACTGAAACAAAGTCCAGGCATAA 48256 Query 48201 CCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAA-GAGCCAGAGAAGAAGATGCCCTCC 48259 || |||| || | ||| ||| || ||| ||| || |||||||| |||||||||||| Sbjct 48257 GGCCTCTCTTCTTCAACCA-AAAGATGGCGCAAAAGGAACCAGAGAAAAAGATGCCCTCC 48315 Query 48260 ACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAG-CGTTCTTGTCTGAGATCCAGGA 48318 || || ||||| || ||||| | | |||| | || || ||| ||||| Sbjct 48316 ACAGCAGCGAAGGCCACGAGCCGGTGAGC-AAAGCCGTCGGGGTTTTCT---ATCCACTT 48371 Query 48319 AAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---G 48375 | ||||| || || ||||| || | |||| ||||| ||||| ||||| | Sbjct 48372 GATGGCCCACTCAGCTTTCTTTCGGACGGTAGGCACGGTCTCGATGGCGTTGAAGAGGCG 48431 Query 48376 CTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGA 48435 | ||| ||| | |||| || ||||| || ||| | ||||||||| || Sbjct 48432 GTCCTT---CTCCAAGGGGTCCTTCACGTAGGTGTCGATCAGGAGGGAGTACATCTCCGA 48488 Query 48436 GTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCAC 48495 ||| | |||||| || |||||||| || ||||||||| | ||||| || ||||| Sbjct 48489 GTGGATATTCTCAATGGCGATCTGAAAGCCGTAGAAGCAGCGAGCCTCGGGTACTTGCAC 48548 Query 48496 TTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAA 48555 || | ||| | | || ||||| || || || || || || |||||||| Sbjct 48549 CTCCTTCATGAAGCGGACGGCCAAGTTCTCCACAACGATTCCGTCCGAGGCGGCAAAGAA 48608 Query 48556 GGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTAC 48615 ||| ||||| || | | |||| |||||||| | | ||| |||||| | | Sbjct 48609 GGCCAGGACGTGGGTGATAAAATAGCGCTCGTCCTCAGAGAGCTTCTTCCAGTCGGTGAG 48668 Query 48616 GTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675 |||| | | |||||||| || || | ||||||||| || || || |||||||| Sbjct 48669 ATCTTGGGCAAGGTCCACCTCCTCGGCGGTCCAGAAGCTGGCCTCGGCCTTCTTGTACAT 48728 Query 48676 GCCCCATAT 48684 |||| || Sbjct 48729 CTCCCAGAT 48737 >seq182 Length=84632 Score = 181 bits (200), Expect = 2e-40 Identities = 326/471 (69%), Gaps = 19/471 (4%) Strand=Plus/Minus Query 48125 AGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAG 48184 ||||| || |||||||| | |||| |||||| |||| ||| |||||| ||||| |||| Sbjct 22316 AGCATACAAGCAAAGTCACAATGCATGCCTTCATCCCTGCTTATGAGCTCGTTGCTGAAG 22257 Query 48185 CAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAG 48244 | ||| |||||||| | ||| || | || |||||||| || || ||| ||||| ||| Sbjct 22256 CTGAGCCCAGGCATCAGCCCTCTTTTCTTCAGCCAGAAGATGGCGCAGAAGGAGCCCGAG 22197 Query 48245 AAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTG 48304 ||||||||||| |||||||| || || || |||||| | | |||| ||| Sbjct 22196 AAGAAGATGCCTTCCACTGCGGCAAAGGCAATGAGCCGCAGAGCAAAAGCTTGTGGCTTT 22137 Query 48305 TCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATG 48364 ||| ||||| |||||||| || ||||||||||| | || |||| |||||| ||| Sbjct 22136 TCT---ATCCAACGCAGCGCCCATTCGGCCTTCTTCTTCACGCTAGGCACCGTCTCAATG 22080 Query 48365 GCCCGGAAGAGCTT----CTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAG 48417 || |||||||| || | ||| |||| || ||||| ||||||| Sbjct 22079 GCGTTAAAGAGCTTAGCCTTTTCTTTCA----CGTCTTTGACGTAGGTGTCGATGAGCAG 22024 Query 48418 CTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCT 48477 | | ||||||||| ||||| | ||||| || ||||| || || ||||||||| | Sbjct 22023 C---GAGTACATCTCCGAGTGGATGTTCTCCATGGCGATTTGAAAGCCGTAGAAGCAACG 21967 Query 48478 GGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCC 48536 ||||| || || ||||| | ||| | |||| || ||||| || || | Sbjct 21966 TGCCTCCGGCAGTTGAACTTCCTTCATGAAGC-GGGCAGCAAGGTTCTCCACCACGATGC 21908 Query 48537 CATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGT 48587 |||| || ||||| || ||||| | || || || | || ||||| |||| Sbjct 21907 CATCCGAGGCAGCGAAAAAGGCCAACACGTGCTTGATAAAGTGGCGTTCGT 21857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931361642492160