Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 174 2e-38 >seq3 Length=147229 Score = 174 bits (192), Expect = 2e-38 Identities = 613/944 (65%), Gaps = 25/944 (3%) Strand=Plus/Minus Query 75145 TTACTTTGGTCTCAAAACCCTTGAGAAGAGCTA--TCTTCAACGGCTCGATGGCATCCTC 75202 ||||||||| | || ||| | |||| |||||| ||||||| | | || |||| || Sbjct 144391 TTACTTTGGCTTTAAGACCTTGGAGAGGAGCTACCTCTTCAAGG--TGGAGGGCAAGATC 144334 Query 75203 ATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATT 75262 | || | || || ||||| ||||||| || || ||||||||||| || ||||||| Sbjct 144333 GTTGAGAGGCCTCAACACATGATCATGCGAGTTGCCATCGGCATCCATATGGGAGACATT 144274 Query 75263 GATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACC 75321 | | ||| | | ||||| ||| | |||||| || | | || | |||||| || || Sbjct 144273 GCTGCTGCCATTGAGACCTACAATCTCATGTCC-AACCTCTACTTTACTCACGCCACCCC 144215 Query 75322 AACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAA 75381 || |||||||| || || ||| | ||||| | || ||||| | || | | Sbjct 144214 CACTCTCTTCAACGCCGGCACAGAGCGGCCGCAACTCTCTTCCTGCTTTTTGCTCACGAT 144155 Query 75382 CAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAA 75441 | ||||||| ||| | || ||||| | || || | | | || || ||||| || Sbjct 144154 GAGGGAGGACAGCATCGAGGGCATCTACGACACCCTAAAGCAATGCGCCTTGATCTCCAA 144095 Query 75442 GTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAA-ATCTCGTATTC 75500 | ||||| || || || | | | || | | ||| | | || || | Sbjct 144094 GGCCGCTGGTGGCATCGGCCTCAGCGTACACACAATCCGTGCCTCGCACAGCTAC-ATCC 144036 Query 75501 GGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 75560 | || || ||||| || | ||| | || || ||||||||||| ||||||| ||| | Sbjct 144035 GTGGAACTAATGGCACGTCGAACGGTCTCATCCCGATGCTTCGCGTCTTTAACGACACTG 143976 Query 75561 CGCGCTATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAAC 75617 | | || || | |||| || | ||||| || | | || ||||||||||| | Sbjct 143975 CCAGATACGTCGACCAAGGAGGAGGCAAACGCAAAGGAGCTTTTGCTGTCTACTTGGAGC 143916 Query 75618 CATGGCATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGAG 75676 ||||||| || || | | ||||| || ||| | | || ||||| || | || ||| Sbjct 143915 CATGGCACGCGGACGTTTTCGAGTTTCTGGAGCTGAAGAAG-AACCACGGCAAGGAGGAG 143857 Query 75677 GCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTT 75736 || ||||| ||||||| | || ||| |||| ||||| ||||||||||| || Sbjct 143856 CTGCGCGCCAGAGACCTCTTTTACGCGCTCTGGGTTCCGGACCTATTCATGAAGCGAGT- 143798 Query 75737 GAGGAGGGTGGTC---AATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC 75793 |||| | || | ||||| || || ||||| || | || || || | | || Sbjct 143797 --GGAGAGCAATCAGGAGTGGTCCCTGTTTTGTCCCAACGAAGCTCCCGGCTTGGCTGAT 143740 Query 75794 GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAAT 75853 | ||| ||||||||||| || |||||||| || ||| ||||||| |||||| Sbjct 143739 GTCTGGGGAGAGGAGTTTGAGGCGCTCTACACTCGATACGAACAGGAGGGCCGAGCCAGG 143680 Query 75854 GCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913 || || ||| || | ||| || || || | |||| ||||| || Sbjct 143679 AGGAGCGTTAAGGCCCAAGAGCTCTGGTTCGCCATCCTGGAGAGCCAGATAGAGACCGGC 143620 Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973 || || |||||||| |||||||| | || ||| ||| |||||| |||| | || Sbjct 143619 ACGCCCTATATGCTATACAAGGACTCGTGCAACCGCAAGTCCAACCAACAGAACCTCGGC 143560 Query 75974 ACAATCAAGAGCTCA---AATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 || || | ||| || ||||||||||| || | |||||||| ||||| || Sbjct 143559 AC---CATTCGTTCAAGCAACCTTTGCACGGAGATCATGGAGTACACCTCCAAGGACGAA 143503 Query 76031 ACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT 76074 |||||| ||||| | || || |||| ||||| |||| ||| Sbjct 143502 GTGGCTGTGTGCAACCTCGCTTCTCTCGCTCTTCCCAAGTTTGT 143459 Score = 89.7 bits (98), Expect = 6e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 76475 ATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACC 76534 ||||||||| | || || | ||||| | ||| |||| || ||||| |||||||||||| Sbjct 143040 ATCAAGGAGCACGGCCTGAGGAACAGCTTGTTGGTGGCTCCCATGCCTACAGCCTCCACC 142981 Query 76535 GCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGA 76594 | || ||| | || || ||||| |||||||| || ||||| | ||||||||| | Sbjct 142980 TCGCAGATCCTCGGCAACAATGAGTGCTTTGAGCCCTACACCTCCAACATCTACTCTCGC 142921 Query 76595 AGAACCCTCGCAGGTGAGTTTGTCATTGTCAACA 76628 | | | | || || || || ||||||||||| Sbjct 142920 CGCATCTTGGCTGGAGACTTCACCATTGTCAACA 142887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596459987793120