Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq4150 86.0 5e-12 seq5 86.0 5e-12 seq201 82.4 6e-11 >seq4150 Length=1450 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || ||||| || | || ||||| ||||| ||| | || |||| || Sbjct 216 AATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCTTC 157 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | || || |||||||| ||||| || ||| | ||| ||||| Sbjct 156 GGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGATCA 97 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | | || | ||||| || ||||||||||| | | || |||| || ||||| Sbjct 96 GCAACGCTTGATCTTCGCGGGCAAGCAGCTGGAGGACGGTCGTACCCTGGCCGACTACAA 37 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||| || || || ||||| | ||| |||| Sbjct 36 CATCCAGAAGGAGTCTACCCTCCACTTGGT 7 >seq5 Length=69586 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || ||||| || | || || || ||||| || ||||| |||| || Sbjct 14372 AATGCAAATTTTCGTCAAGACCCTCACGGGAAAGACCATCACTCTCGAAGTGGAGTCTTC 14313 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | || || |||||||| ||||| |||||| | ||| ||| || Sbjct 14312 GGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCA 14253 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | | || | || || || ||||||||||| | | | || | || || ||||| Sbjct 14252 GCAACGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTACAA 14193 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||| || || || ||||| | ||| |||| Sbjct 14192 CATCCAGAAGGAGTCTACTCTTCACTTGGT 14163 >seq201 Length=21658 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC---CT 110329 ||||| || || ||||| || ||||| ||||| || |||||| | || |||| || Sbjct 13997 ATGCAGATCTTCGTCAAGACCTTAACTGGCAAGACTATTACCTTGGAGGTGGAGAGCTCT 14056 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| || ||| | || || || ||||| ||||| |||||| | ||| || Sbjct 14057 GAC---ACCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAAGGCATTCCCCCCGAC 14113 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || | || || | ||||| || ||||||||||||| | | || | || |||||| Sbjct 14114 CAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGCACTCTCGCTGATTAC 14173 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || || || || || | ||| |||| | | ||||||| || Sbjct 14174 AACATCCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGTTTGCGAGGTGG 14223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412767641878607