Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq128 122 3e-22 >seq128 Length=25026 Score = 122 bits (134), Expect = 3e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 111433 GCCATCTTCACCTTCAAAGCGAAAGGAATTTCAGGAATCAACTCATTGTGCAGAAGGTCA 111492 ||||||||||| ||| || || ||||| ||||||| | ||| ||||| |||| || Sbjct 6227 GCCATCTTCACTTTCTTGGCAAACGGAATGACAGGAATGAGCTCGTTGTGTAGAACATCG 6286 Query 111493 AACAGAGAACCAAGGGTCATGTACTCCATCACAATGCACATCTTCGGCGGTTTGGTCGAG 111552 |||||||||| || ||||||||||||||| |||||||| ||||| || | || | Sbjct 6287 TACAGAGAACCGAGTTGCATGTACTCCATCACTATGCACATGTTCGGTGGCTGAGTGCAA 6346 Query 111553 GCGGCCATGAAAAGCACCACGTTGGGGTGGCGCAG 111587 || |||||||| ||||||||||| || || || || Sbjct 6347 GCCGCCATGAATAGCACCACGTTTGGATGACGAAG 6381 Score = 87.8 bits (96), Expect = 7e-12 Identities = 133/188 (71%), Gaps = 5/188 (3%) Strand=Plus/Plus Query 109486 GTCCAGCAAGGAGTTCCACAGCGTGTCATTGTGGCATTCTCTTCCTTGATGCGAGCAAAG 109545 ||||| |||||||| ||||| ||||||||||| || || ||||| ||| |||||||| Sbjct 3777 GTCCAACAAGGAGTGCCACAACGTGTCATTGTTGCGTTTTCTTCTCGGATACGAGCAAAA 3836 Query 109546 CCAAAGTCAGCCACCTTGGTGATGTTTGCGTCGTTGTCAATCAACAGATTAGACGGTTTC 109605 |||||||| || | | | | ||| || | ||||| || || || || ||| Sbjct 3837 CCAAAGTCTGCTA---TTTTTACGTTCCAGTTTTCGTCAACTAAAAGGTTGGAGCTCTTC 3893 Query 109606 AGATCACGGTGGACGATGGTGGGTGTGAGAGAGTGAAGGTAGTTAACACCAAGGGC--TG 109663 | ||||| |||| ||| | ||| || ||||||||||||| | ||||| || || Sbjct 3894 AAGTCACGATGGATGATAATAGGTTCCAGCGAGTGAAGGTAGTGGAGGCCAAGCGCAATG 3953 Query 109664 CGCCGTGC 109671 | ||||| Sbjct 3954 CTGCGTGC 3961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951606782831272