Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1075 147 2e-30 seq5612 129 5e-25 seq629 123 2e-23 seq201 116 3e-21 seq1840 114 1e-20 seq11709 111 1e-19 seq294 105 5e-18 seq3021 104 2e-17 seq6154 84.2 2e-11 >seq1075 Length=2391 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 29558 GTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG 29617 |||| || | | ||| || ||||| || || ||||| || || || ||||| || || | Sbjct 1677 GTCCGCCACGAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 1618 Query 29618 CAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCG 29677 | | ||||||| || || ||||| || || || | ||||||| ||||| || || | Sbjct 1617 CCAGGGTGCGACCGTCCTCCAGTTGCTTACCCGCGAAGATCAATCGCTGCTGGTCGGGAG 1558 Query 29678 GAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 | |||||||| |||||||| | ||||| || || | || | ||| |||||| || | Sbjct 1557 GGATACCCTCCTTGTCTTGGATCTTTTGCTTCACGTTCTCAATAGTATCAGAAGACTCGA 1498 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | |||||||| || ||||||||||| ||||| ||||| || |||||||| Sbjct 1497 CCTCAAGAGTGATGGTTTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 1449 >seq5612 Length=1165 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 29558 GTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG 29617 |||| || | | ||| || ||||| || || ||||| || || || ||||| || || | Sbjct 787 GTCCGCCACGAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 846 Query 29618 CAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCG 29677 | | ||| ||| || || || || |||||||| | ||||| | ||||| || || | Sbjct 847 CCAAGGTACGACCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGAG 906 Query 29678 GAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 | ||||| || |||||||| | ||||| || || | || | ||| |||||| || | Sbjct 907 GGATACCTTCCTTGTCTTGGATCTTTTGCTTCACGTTCTCGATAGTATCAGAAGACTCGA 966 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | |||||||| || ||||||||||| | ||| || || || |||||||| Sbjct 967 CCTCAAGAGTGATGGTTTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 1015 >seq629 Length=7623 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||| || || ||||| || || || ||||| || || || | |||||| Sbjct 4180 ACGCAAGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCC 4121 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || ||||| || | ||||| | ||||| || || ||||||||||| || Sbjct 4120 GTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTT 4061 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || |||||| |||| | |||||||| ||| || || || || || Sbjct 4060 GTCCTGAATCTTCTGCTTGACATTTTCAATGGTGTCAGAGGATTCCACCTCCAGGGTGAT 4001 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | ||| || || || |||||||| Sbjct 4000 GGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 3965 >seq201 Length=21658 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | |||||| || ||||| || || ||||| || || || ||||| ||||| || Sbjct 14223 CCACCTCGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCG 14164 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || ||||| || | || | | ||||| || || ||| Sbjct 14163 AGAGTGCGGCCATCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 14104 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | ||||| ||||| | || | |||||||| || || Sbjct 14103 ATGCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTCTCGATGGTGTCAGAGCTCTCCACC 14044 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || ||||| |||||||||||||| || || || |||||||| Sbjct 14043 TCCAAGGTAATAGTCTTGCCAGTTAAGGTCTTGACGAAGATCTGCAT 13997 >seq1840 Length=2099 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| ||||| || || || || || ||||| || || || | |||||| Sbjct 320 ACGGAGGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGGCC 261 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || ||||| ||| | || | | |||||| || || || |||||||| || Sbjct 260 ATCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCGGGAGGGATACCCTCCTT 201 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || || || | || | |||||||| || || || | || || Sbjct 200 GTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCAGAGCTCTCCACCTCCAAGGTGAT 141 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| |||||||||||||| || || || |||||||| Sbjct 140 AGTCTTGCCAGTTAAGGTCTTGACGAAGATCTGCAT 105 >seq11709 Length=580 Score = 111 bits (122), Expect = 1e-19 Identities = 155/216 (72%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || || || || || || ||||| || || || | ||||||| Sbjct 227 ACGGAGGACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACC 286 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || |||||||| || | |||| | |||||| || || ||||||||||| || Sbjct 287 GTCCTCCAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGG-GGAATACCCTCCTT 345 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||||| ||||| | || | ||||| || || || || | || || Sbjct 346 GTCTTGGATCTTTTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTAAT 405 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| ||||| || || || |||||||| Sbjct 406 GGTCTTACCAGTCAAGGTCTTGACGAAGATCTGCAT 441 >seq294 Length=52215 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||||| ||| || || | || || ||||| || || ||||| || ||||| || Sbjct 28958 CCTCCCCTCAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGAATATTGTAATCAGCG 29017 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || || || ||||| ||||| || | ||||| | ||||| || || ||| Sbjct 29018 AGGGTACGGCCGTCCTCCAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGGA 29077 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || || || || | || | ||||| || || ||| Sbjct 29078 ATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGGACTCCACT 29137 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || || || || || | ||| || || || || |||||| Sbjct 29138 TCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAAATTTGCATT 29185 >seq3021 Length=1716 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||| |||||| || || ||||| || || || ||||| || || || | |||||| Sbjct 1 CGCAACACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCG 60 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || |||||||| | |||| | |||||||| || || || ||||| || Sbjct 61 TCCTCCAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGATCGGGGGGGATTCCCTCCTTA 120 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | ||||| || ||| | || | ||||| || || || || || || ||| Sbjct 121 TCCTGGATCTTTTGCTTCACATTCTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATA 180 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||| || | || || || || |||||||| Sbjct 181 GTTTTGCCTGTGAGCGTCTTCACGAAGATCTGCAT 215 >seq6154 Length=1076 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 29656 ATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTT 29715 ||||| | ||||| || || ||||| || || |||||||| | |||||||| || || Sbjct 1071 ATCAAACGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCTTGGATCTTTTGTTTCACGTTT 1012 Query 29716 TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACA 29775 || | ||||| || || ||||| || || || ||||||||||| || || || || Sbjct 1011 TCAATGGTGTCGGAGCTCTCCACTTCCAGGGTGATGGTTTTGCCAGTCAACGTCTTGACG 952 Query 29776 AATATCTGCAT 29786 || |||||||| Sbjct 951 AAGATCTGCAT 941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385150190267559