Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3021 113 3e-20 seq7184 109 4e-19 seq629 109 4e-19 seq201 96.9 2e-15 seq104 95.1 8e-15 seq1075 93.3 3e-14 seq294 87.8 1e-12 seq1840 84.2 1e-11 >seq3021 Length=1716 Score = 113 bits (124), Expect = 3e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || |||||||| || || ||| ||| || || |||||||| |||| | ||||| || Sbjct 1 CGCAACACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCG 60 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || |||| || || || || ||||||| |||||||||||| | || | || || || Sbjct 61 TCCTCCAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGATCGGGGGGGATTCCCTCCTTA 120 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || || || || ||| |||| || | ||||||| || ||||| || | ||||| Sbjct 121 TCCTGGATCTTTTGCTTC-ACATTCTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGAT 179 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| ||||| | ||| || || ||||||||||| Sbjct 180 AGTTTTGCCTGTGAGCGTCTTCACGAAGATCTGCAT 215 >seq7184 Length=931 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| |||||||| || |||||| ||| || || |||||||| |||| Sbjct 600 CCTCCCCTCAGACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 659 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| |||| |||| || || || ||||| |||| ||||||||||| | || Sbjct 660 AAGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGAGGG 719 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || || |||| || | ||||| |||||||| Sbjct 720 ATGCCTTCCTTGTCCTGGATCTTTTGCTT-GACATTTTCAATAGTGTCAGAGGATTCCAC 778 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || | || || || |||||||||||| Sbjct 779 TTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 827 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || |||||| ||| ||||| ||||||||||| | | ||||| |||| ||| Sbjct 162 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCAGCCAAGGTGCGGCCGTCCTCC 221 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || ||||| || || | ||||||||| || | || | || || ||||| Sbjct 222 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 281 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || || ||| || | || | ||||||| ||||| || | ||||| || || Sbjct 282 ATCTTTTGCTTC-ACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTGATGGTCTT 340 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | || || || |||||||||||| Sbjct 341 TCCGGTAAGAGTCTTGACGAAGATCTGCATA 371 Score = 82.4 bits (90), Expect = 5e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| |||||||| || |||||| ||| || || |||||||| |||| | || || | Sbjct 383 ACGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGACC 442 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||| || || ||||| || || | |||||||| || | || | || || || Sbjct 443 ATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTT 502 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| |||||||| |||| | | || | ||||||| ||||| || | || | Sbjct 503 GTCCTGGATTTTCTGCTTCA-CGTTCTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTAA 561 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || || || || || ||||||||||| Sbjct 562 TGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 598 >seq629 Length=7623 Score = 109 bits (120), Expect = 4e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| || ||||| || || ||| ||| || || |||||||| |||| || ||||| | Sbjct 4180 ACGCAAGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCC 4121 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| |||| || || ||||| || ||||| |||||||| || | || | ||| || || Sbjct 4120 GTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTT 4061 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||| ||||| || | ||| ||| |||||| |||||||| || | |||| Sbjct 4060 GTCCTGAATCTTCTGCTTGA-CATTTTCAATGGTGTCAGAGGATTCCACCTCCAGGGTGA 4002 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || || || | || || || ||||||||||| Sbjct 4001 TGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 3965 Score = 100 bits (110), Expect = 2e-16 Identities = 169/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | ||| | ||||| || || ||| ||| || || ||||||||||| | | Sbjct 3963 CCTCCTCTAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCG 3904 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || ||||| || |||||||||||||| || | || Sbjct 3903 AGAGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGA 3844 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || ||||| ||| || | || | |||||| || || || Sbjct 3843 ATGCCTTCCTTGTCCTGGATCTTCTGCTTC-ACGTTCTCGATGGTGTCAGAAGACTCGAC 3785 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT--AGTTGGTGTG 33759 || | ||||| || || || || | || || || || || ||||| ||| ||||| Sbjct 3784 CTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCATTGTGTTTGTGTG 3725 Query 33760 T 33760 | Sbjct 3724 T 3724 >seq201 Length=21658 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || |||||| ||| ||||| |||||||| |||| Sbjct 13768 ACCACCACGGAGACGAAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGC 13709 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| |||| || || || || || |||||||||||||| || | || Sbjct 13708 CAGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGAGG 13649 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || ||||| || || | || | ||||||| |||| Sbjct 13648 TATGCCCTCCTTGTCCTGGATCTTCTGCTT-GACGTTCTCGATGGTGTCGGAGCTCTCCA 13590 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 | |||| ||||| || || || || | || || || ||||| ||||| || Sbjct 13589 CCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCATTGT 13538 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | ||||| || || ||| ||| || || |||||||| |||| | Sbjct 13995 CCTCCCCTCAGACGAAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 13936 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| ||||| || || || || || || | |||||||| || | || Sbjct 13935 AGGGTGCGGCCGTCCTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGA 13876 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || ||||| || | | | || | ||||||| ||||| Sbjct 13875 ATGCCTTCCTTGTCCTGGATCTTCTGCTTGA-CGTTCTCGATGGTGTCGGAGCTCTCCAC 13817 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || || || || || | || || || |||||||||||| Sbjct 13816 TTCCAGGGTAATAGTCTTGCCGGTAAGAGTCTTGACGAAGATCTGCATA 13768 Score = 86.0 bits (94), Expect = 4e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| |||||| | ||||| || || ||| ||| || || ||||||||||| | | Sbjct 14223 CCACCTCGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCG 14164 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || || || || | |||||||| || | || Sbjct 14163 AGAGTGCGGCCATCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 14104 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTC 33698 | ||||| ||||| || || || || || | || | |||||| ||| || Sbjct 14103 ATGCCTTCCTTGTCCTGGATCTTTTGCTT-GACGTTCTCGATGGTGTCAGAGCT---CTC 14048 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| || | || || || || || ||||| || || || ||||||||||| Sbjct 14047 CACCTCCAAGGTAATAGTCTTGCCAGTTAAGGTCTTGACGAAGATCTGCAT 13997 >seq104 Length=38954 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || || | ||| | ||||| || |||||| ||| || || |||||||| |||| Sbjct 25971 CCTCCCCTAAGACGAAGAACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCC 26030 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || || || |||||||||||||| || | || Sbjct 26031 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGAGGA 26090 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || || ||||| || || | || | |||||| || || || Sbjct 26091 ATGCCTTCCTTATCTTGGATCTTCTGCTT-TACGTTTTCGATGGTGTCAGAAGACTCGAC 26149 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| ||||| || || || || || || || || |||||||||||| Sbjct 26150 CTCAAGAGTGATGGTCTTTCCAGTCAAGGTCTTGACGAAGATCTGCATA 26198 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| |||||| | ||||| || || ||| ||| || || |||||||| || | Sbjct 25743 CCACCTCGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 25802 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| |||| |||| || || || || || |||| || ||||| || | || Sbjct 25803 AAGGTGCGCCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGTTGCTGGTCAGGAGGA 25862 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || ||||| |||| | | || | ||||| || || || Sbjct 25863 ATGCCTTCCTTGTCCTGGATCTTCTGCTTCA-CGTTCTCGATAGTGTCAGAAGACTCAAC 25921 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || || || || || ||||||||||| Sbjct 25922 CTCGAGAGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 25969 >seq1075 Length=2391 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || || ||| ||| || || |||||||| |||| || ||||| |||| ||| Sbjct 1657 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCC 1598 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| || || || || ||||| |||||||| || | || | ||| || ||||| Sbjct 1597 AGTTGCTTACCCGCGAAGATCAATCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCTTGG 1538 Query 33661 ATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || || |||| | | ||| || || || || || |||| ||||| ||||| Sbjct 1537 ATCTTTTGCTTCA-CGTTCTCAATAGTATCAGAAGACTCGACCTCAAGAGTGATGGTTTT 1479 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || || || || ||||||||||| Sbjct 1478 GCCAGTCAAGGTCTTAACGAAGATCTGCAT 1449 >seq294 Length=52215 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || || || ||| || || |||||||| |||| || ||||| |||| ||| Sbjct 28748 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCC 28807 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| || ||||| || |||| || ||||| || | || | ||||| ||||| Sbjct 28808 AGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGG 28867 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || ||||| |||| | | || | ||||||| ||||| || | || || || || Sbjct 28868 ATCTTCTGCTTCA-CGTTCTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTAATGGTCTT 28926 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| || || || || || ||||||||||| Sbjct 28927 ACCAGTCAAGGTCTTGACGAAGATCTGCAT 28956 >seq1840 Length=2099 Score = 84.2 bits (92), Expect = 1e-11 Identities = 160/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || || || ||| || || |||||||| |||| Sbjct 332 ACCACCGCGGAGACGGAGGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGC 273 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || |||| || || |||||||| || | || ||||| || | || Sbjct 272 TAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCGGGAGG 213 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | ||| || ||||| || ||||| |||| | | || | |||||| ||| | Sbjct 212 GATACCCTCCTTGTCCTGGATCTTCTGCTTCA-CGTTCTCGATGGTGTCAGAGCTC---T 157 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || | ||||| || || || ||||| || || || ||||||||||| Sbjct 156 CCACCTCCAAGGTGATAGTCTTGCCAGTTAAGGTCTTGACGAAGATCTGCAT 105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328645114630080