Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq14654 105 6e-18 seq7184 95.1 1e-14 seq3021 95.1 1e-14 seq5612 93.3 4e-14 seq53 93.3 4e-14 seq104 89.7 5e-13 seq1590 84.2 2e-11 seq6154 82.4 7e-11 seq1075 82.4 7e-11 seq294 82.4 7e-11 >seq14654 Length=53260 Score = 105 bits (116), Expect = 6e-18 Identities = 345/527 (65%), Gaps = 18/527 (3%) Strand=Plus/Minus Query 46750 TCGAGCACGTGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCG 46809 ||||| |||||| ||| || || || || |||||||||| |||||||| || | | Sbjct 48415 TCGAGACCGTGCCTACCGTCCGAAAGAAAGCTGAGTGGGCCATCAAGTGGATAGAAAACC 48356 Query 46810 A-GACCGCCACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttt 46868 ||| || ||| ||| || | ||||| ||||| || || ||| | ||||| Sbjct 48355 CCGACGGCTTTGCTCACCG---GC-TCGTGGCCTTCGCTGCTGTGGAGGGCATCTTTTTC 48300 Query 46869 tCGGGCAGTTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACG 46928 || || ||| |||||| |||| | || | | |||| | ||||| || || Sbjct 48299 TCTGGTTCCTTTTGCGCCATCTTTTGGTTGAAGAAGAGAGGCCTTATGCCTGGACTTTGT 48240 Query 46929 TTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCTCTAT 46988 |||||||| ||| |||| | ||||| || | ||| |||||||| || ||| Sbjct 48239 TTCAGTAATGAGCAGATCAGCAGGGACGAGGGCATGCACTGTGACTTTGCCTGCCTCCTC 48180 Query 46989 TACAAGACGCGCGTGAATGAGAAATTAAACTCGGAC-ACGATCCTGAGCATGTTTAGGG- 47046 ||||| | ||| |||| | ||| || ||| || | || | ||| | Sbjct 48179 TACAATA------TGATCCAGAACAGACCCTCCAACGACGTGCCC-ACCAAGATTATCGC 48127 Query 47047 --AGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGG 47104 |||| ||| || |||||||||||| | | | | | || || || | | || Sbjct 48126 TGAGGCAGTGGAGATTGAAAAGGAGTTTGTGAGCGAGTCCCTTCCAGTGAGGCTCATCGG 48067 Query 47105 CATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCA 47164 ||||||||| || |||||| | || ||||||||||||||||| || ||| ||||| Sbjct 48066 CATGAACGCCGAGCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTGGTGGC 48007 Query 47165 GCTCGGACAACCGAAATAT-TTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTT 47223 ||||| | | || || | || ||| || |||||||| | ||| | ||| | Sbjct 48006 CCTCGG-CTGCGAGAAGATCTACAACGCTACGAACCCGTTTGACTGGATGGAGCTCATCT 47948 Query 47224 CGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTAT 47270 | | || ||||| ||||| |||||||||| || || ||||||||| Sbjct 47947 CCTTGGAAGGCAAGACCAACTTTTTCGAGAGGCGCGTGGGAGAGTAT 47901 >seq7184 Length=931 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | ||||| || || |||||||||||| || ||| || Sbjct 612 CGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCG 671 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || ||||| || || | | |||| || ||||| ||||| ||||| |||||||| || Sbjct 672 TCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTG 731 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||||| || | | ||| | ||| || | | |||||||| | || | Sbjct 732 TCCTGGATCTTTTGCTTGACATTTTCAATAGTGTCAGAGGATTCCACTTCCAAGGTGATG 791 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || || || || || | ||| |||||||| Sbjct 792 GTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 826 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | ||||| || || |||||||||||| || |||||| | Sbjct 384 CGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGACCA 443 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || ||||| || |||| |||| || ||||| || || || || ||||| || || Sbjct 444 TCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTG 503 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||||| || |||| | || | || |||| |||||| || | || | Sbjct 504 TCCTGGATTTTCTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTAATG 563 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 || || ||||||| || || | ||| ||||||||| || Sbjct 564 GTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCATGCCT 602 >seq3021 Length=1716 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| || || |||||||||||| || ||| || Sbjct 1 CGCAACACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCG 60 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || ||||| || || | | || |||||||| ||||| || || || || || ||| Sbjct 61 TCCTCCAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGATCGGGGGGGATTCCCTCCTTA 120 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || ||||| |||| | || | || |||| | |||||| |||| || | Sbjct 121 TCCTGGATCTTTTGCTTCACATTCTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATA 180 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || || || || || | ||| |||||||| Sbjct 181 GTTTTGCCTGTGAGCGTCTTCACGAAGATCTGCAT 215 >seq5612 Length=1165 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || || |||||||||||| || |||||| || || Sbjct 807 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGACCGTCCTCC 866 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || || | |||| | ||||| || || ||||| || ||||| || || Sbjct 867 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATACCTTCCTTGTCTTGG 926 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||||| |||| | || | |||||| | | ||| || || | || | ||||| Sbjct 927 ATCTTTTGCTTCACGTTCTCGATAGTATCAGAAGACTCGACCTCAAGAGTGATGGTTTTG 986 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || | ||| |||||||| Sbjct 987 CCAGTCAGGGTCTTGACGAAGATCTGCAT 1015 >seq53 Length=79819 Score = 93.3 bits (102), Expect = 4e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||| | || | | ||||||||| || |||||||||||| || ||| || ||||||| Sbjct 30323 ACCGAGTGAAGGGTTGACTCTTGCTGGATGTTGTAGTCGAGCAAGGTGCGACCATCTTCG 30264 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 |||||| | || | | ||||| ||||||||||| ||||| || ||||||||||| Sbjct 30263 AGCTGTATGCCAGCGAAAATTAGCCGCTGTTGATCCGGAGGAATTCCTTCTTTATC 30208 >seq104 Length=38954 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||| |||||||||||| || |||||| || || ||||| || |||| Sbjct 26232 GACTCCTTTTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCCAGCTGCTTGCCGGCG 26291 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| || || || || |||||||| || || || ||||| |||| Sbjct 26292 AAGATCAGGCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTTTGCTTCACG 26351 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| |||||| || | || | || |||||||| || || || Sbjct 26352 TTCTCGATGGTGTCGGAGCTCTCCACCTCCAAAGTGATTGTCTTACCAGTGAGGGTCTTG 26411 Query 132110 ATGAAAATCTGCAT 132123 | ||| || ||||| Sbjct 26412 ACGAAGATTTGCAT 26425 Score = 82.4 bits (90), Expect = 7e-11 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 ||||| || | ||||| || | | | ||||| || || ||||||||||| || ||| Sbjct 25749 CGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTG 25808 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 ||| || || ||||| || || | |||| || || || || || ||||| |||||| Sbjct 25809 CGCCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGTTGCTGGTCAGGAGGAATGCCT 25868 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || || || || || || |||| | || | ||| || | | ||| || |||| Sbjct 25869 TCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATAGTGTCAGAAGACTCAACCTCGAGA 25928 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 || | || || || |||| || || | ||| ||||||||| || Sbjct 25929 GTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCATGCCT 25973 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | ||||| || || |||||||||||| || ||| || ||| || Sbjct 25988 AACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTC 26047 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| || || | |||| | |||||| || || ||||| |||||||| ||||| Sbjct 26048 CAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGAGGAATGCCTTCCTTATCTTG 26107 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || || || || | | ||| | || || | | ||| || || | || | || || Sbjct 26108 GATCTTCTGCTTTACGTTTTCGATGGTGTCAGAAGACTCGACCTCAAGAGTGATGGTCTT 26167 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| || || | ||| |||||||| Sbjct 26168 TCCAGTCAAGGTCTTGACGAAGATCTGCAT 26197 >seq1590 Length=2191 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| || | |||||| || | | | ||||| || || |||||||||||| || ||| Sbjct 121 CGCAGACGAAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTG 180 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || || ||||| || || |||| |||| || || || || || ||||| |||||| Sbjct 181 CGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGGATGCCT 240 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || || || || || || || | | || | || |||| | ||||||||||| Sbjct 241 TCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGATGACTCCACTTCGAGG 300 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || || || || || || |||||| ||||| Sbjct 301 GTAATGGTCTTTCCCGTGAGGGTCTTCTCGAAAATTTGCAT 341 >seq6154 Length=1076 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | | ||||| || || |||||||||||| || |||||| || || Sbjct 922 AACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTC 863 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| || |||| |||| | || || ||||| || || |||||||| || || Sbjct 862 CAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGGGGAATGCCTTCCTTGTCCTG 803 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || || || |||| | || | || || | | |||||| || | || | || || Sbjct 802 GATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGGACTCCACCTCCAGGGTGATGGTCTT 743 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || || || | |||||| ||||| Sbjct 742 TCCAGTGAGGGTCTTGACGAAAATTTGCAT 713 >seq1075 Length=2391 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || || |||||||||||| || ||| || || || Sbjct 1657 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCC 1598 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || || ||||| | |||| | ||||| || || ||||| || || || || || Sbjct 1597 AGTTGCTTACCCGCGAAGATCAATCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCTTGG 1538 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || ||||| |||| | || | |||||| | | ||| || || | || | ||||| Sbjct 1537 ATCTTTTGCTTCACGTTCTCAATAGTATCAGAAGACTCGACCTCAAGAGTGATGGTTTTG 1478 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 ||||||| || || | ||| ||||||||| || Sbjct 1477 CCAGTCAAGGTCTTAACGAAGATCTGCATGCCT 1445 >seq294 Length=52215 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || || |||||||||||| || ||| || || || Sbjct 28748 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCC 28807 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || || || |||| |||| || || || || || ||||| |||||||| || || Sbjct 28808 AGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGG 28867 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || |||| | || | || |||| |||||| || | || | || ||| Sbjct 28868 ATCTTCTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTAATGGTCTTA 28927 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 ||||||| || || | ||| ||||||||| || Sbjct 28928 CCAGTCAAGGTCTTGACGAAGATCTGCATGCCT 28960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476523628649640