Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq182 145 6e-30 >seq182 Length=84632 Score = 145 bits (160), Expect = 6e-30 Identities = 258/370 (70%), Gaps = 10/370 (3%) Strand=Plus/Plus Query 43916 GAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATT 43975 ||||||||| | || || ||||| || || || || |||||||| ||||| || || || Sbjct 21946 GAAGTTCAACTGCCGGAGGCACGTTGCTTCTACGGCTTTCAAATCGCCATGGAGAACATC 22005 Query 43976 CATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCAT 44035 || ||||| |||||| || || || || || ||| ||||||| | | | || ||| | Sbjct 22006 CACTCGGAGATGTACTCGCTGCTCATCGACACCTACGTCAAAGACGTGAAAGAAAAGGCT 22065 Query 44036 CGATTGTTTAATGCGATAGAAACAGTACCT-GCGATTAAACATAAAGCAGACTGGGCCCT 44094 | ||||| || || || || || ||| ||| | || | || || || ||||| || Sbjct 22066 AAGCTCTTTAACGCCATTGAGACGGTGCCTAGCG-TGAAGAAGAAGGCCGAATGGGCGCT 22124 Query 44095 TAAATGGATA---AATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGT 44151 |||||| || || | | |||||| || || | || ||||| | || Sbjct 22125 GCGTTGGATAGAAAAGCCACAAG---CTTTTGCTCTGCGGCTCATTGCCTTTGCCGCAGT 22181 Query 44152 GGAAGGCATTTTCTTTTCAGGATCGTT-TGCGGCCATATTTTGGTTAAAGAAACGAGGTT 44210 ||||||||| ||||| || || || || ||| ||||| || ||| | |||||| |||| Sbjct 22182 GGAAGGCATCTTCTTCTCGGGCTCCTTCTGC-GCCATCTTCTGGCTGAAGAAAAGAGGGC 22240 Query 44211 TGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCG 44270 ||||||||||| | | || || ||| | ||||| | ||||||||| | ||||| | Sbjct 22241 TGATGCCTGGGCTCAGCTTCAGCAACGAGCTCATAAGCAGGGATGAAGGCATGCATTGTG 22300 Query 44271 ATTTTGCTTG 44280 | |||||||| Sbjct 22301 ACTTTGCTTG 22310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397384798117495