Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3 109 5e-19 seq7184 96.9 3e-15 seq201 93.3 4e-14 seq104 86.0 5e-12 >seq3 Length=147229 Score = 109 bits (120), Expect = 5e-19 Identities = 315/482 (65%), Gaps = 7/482 (1%) Strand=Plus/Plus Query 131602 GGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAA 131661 |||| |||| ||||||| | || |||||| | || || ||||||||||| || Sbjct 143752 GGGAGCTTCGTTGGGACAAAACAGGGACCACTCCTGATTGCTCTCCACTCGCTTCATGAA 143811 Query 131662 CAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCAT 131721 | ||||| ||||| | |||||| || || ||||| || ||| || | || Sbjct 143812 TAGGTCCGGAACCCAGAGCGCGTAAAAGAGGTCTCTGGCGCGCAGCTCCTCCTTGCCGTG 143871 Query 131722 AAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781 | || |||| | | ||| || |||| |||||| ||||| || ||||| || || || Sbjct 143872 GTTCTTCTTCAGCTCCAGAAACTCGAAAACGTCCGCGTGCCATGGCTCCAAGTAGACAGC 143931 Query 131782 CATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATAC 131838 | || |||||||| || || ||||| | || | | | ||| ||| | || Sbjct 143932 AAAAGCTCCTTTGCGTTTGCCTCCTCCTTGGTCGACGTATCTGGCAGTGTCGTTAAAGAC 143991 Query 131839 GCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATT 131898 ||| | ||| || | |||||| | | ||||| || | ||||||||| Sbjct 143992 GCGAAGCATCGGGATGAGACCGTTCGACGTGCCATTAGTTCCACGGATGTAGCTGTGCGA 144051 Query 131899 GGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCA 131958 ||| | |||| |||| ||| |||| || || || || || || ||||| | ||||| Sbjct 144052 GGCACGGATTGTGTGTACGCTGAGGCCGATGCCACCAGCGGCCTTGGAGATCAAGGCGCA 144111 Query 131959 TTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCA 132018 || |||| |||| ||||| || || | ||||||| | || || |||||||| Sbjct 144112 TTGCTTTAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCCTCATCGTGAGCAAAAAGCA 144171 Query 132019 AGAGGACAACTGTTGGTGAAATGTGCCGGC--TGAAAACAATGTGGGGCTGGCGTGTGTA 132076 || || | || | | ||||||||| |||| | | |||||| ||||||| ||| Sbjct 144172 GGAAGAGAGTTGCGGCCGCTCTGTGCCGGCGTTGAAGAGA--GTGGGGGTGGCGTGAGTA 144229 Query 132077 AA 132078 || Sbjct 144230 AA 144231 >seq7184 Length=931 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || ||||| || ||||| || || | |||| |||| || Sbjct 162 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCAGCCAAGGTGCGGCCGTCCTCC 221 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || |||||| | ||||||||||| || || || || | ||||| || || | Sbjct 222 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 281 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | |||| | | || | ||||| | | || ||||| || || || | || Sbjct 282 ATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTGATGGTCTTT 341 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || || ||||| || || ||||| |||||| || Sbjct 342 CCGGTAAGAGTCTTGACGAAGATCTGCATACCT 374 >seq201 Length=21658 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || ||||| || ||||||||| || | |||| |||| || Sbjct 13749 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCC 13690 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | || | |||||| || || || || | ||||| || || | Sbjct 13689 AGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGAGGTATGCCCTCCTTGTCCTGG 13630 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | || | | | || | ||||| | | || || || ||||| || | ||| Sbjct 13629 ATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTG 13570 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || ||||| ||||||||||| Sbjct 13569 CCAGTGAGGGTCTTCACGAAGATTTGCAT 13541 >seq104 Length=38954 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| || | ||||| || | || || || ||||| || ||||||||| | Sbjct 26199 CCACCGCGCAGACGGAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCC 26258 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || |||| || ||||| || |||||| | || || ||||| || || || || Sbjct 26259 AAGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGA 26318 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || |||||| | |||| | | || | ||||| | | || || Sbjct 26319 ATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACC 26378 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | ||| || | || || || || || || || ||||||||||| Sbjct 26379 TCCAAAGTGATTGTCTTACCAGTGAGGGTCTTGACGAAGATTTGCAT 26425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424858275525288