Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 196 6e-45 seq14654 143 3e-29 seq182 91.5 2e-13 >seq3 Length=147229 Score = 196 bits (216), Expect = 6e-45 Identities = 625/961 (65%), Gaps = 19/961 (2%) Strand=Plus/Plus Query 118695 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 118754 ||| |||| ||||| |||| || || || || ||||||| || ||||| ||| Sbjct 143459 ACAAACTTGGGAAGAGCGAGAGAAGCGAGGTTGCACACAGCCACTTCGTCCTTGGAGGTG 143518 Query 118755 TACTCTATAATTTCCGTGCACAAGTT---TGAACTCTTAATGGTGCCCAAGTTCTTTTGA 118811 ||||| || || |||||||| | ||| ||||| ||||||||| | ||||| ||| Sbjct 143519 TACTCCATGATCTCCGTGCAAAGGTTGCTTGAACG---AATGGTGCCGAGGTTCTGTTGG 143575 Query 118812 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 118871 || ||||| ||| |||| |||||||| ||||| || ||||| || ||||| | ||| Sbjct 143576 TTGGACTTGCGGTTGCACGAGTCCTTGTATAGCATATAGGGCGTGCCGGTCTCTATCTGG 143635 Query 118872 GACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCT 118931 || || || || ||||| || || || | ||||||| ||||| Sbjct 143636 CTCTCCAGGATGGCGAACCAGAGCTCTTGGGCCTTAACGCTCCTCCTGGCTCGGCCCTCC 143695 Query 118932 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 118991 | ||||| |||||||| || |||||||| || ||| | | || | | || || Sbjct 143696 TGTTCGTATCGAGTGTAGAGCGCCTCAAACTCCTCTCCCCAGACATCAGCCAAGCCGGGA 143755 Query 118992 GCCTTATCTGGGCAGAAGAGAGACCATT---GACCACCCTCCTCAACCCGCTTCATGAAG 119048 || | | || || || || ||||| | || | |||| || ||||||||||| Sbjct 143756 GCTTCGTTGGGACAAAACAGGGACCACTCCTGATTGCTCTCC---ACTCGCTTCATGAAT 143812 Query 119049 AGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCG-AGCTTCTTCATCCCCCTG 119107 ||||| || | ||||||||| | ||||| || | ||| ||| || || | || || Sbjct 143813 AGGTCCGGAACCCAGAGCGCGTAAAAGAGGTCTCTGGCGCGCAGC-TCCTCCTTGCCGTG 143871 Query 119108 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 119167 || || ||||| ||| || | | ||||||||||| || |||| ||| || || Sbjct 143872 GTTCTTCTTCAGCTCCAGAAACTCGAAAACGTCCGCGTGCCATGGCTCCAAGTAGACAGC 143931 Query 119168 GATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATAC 119224 | | || || || | || | |||| || || || |||||| ||||||| || Sbjct 143932 AAAAGCTCCTTTGCGTTTGCCTCCTCCTTGGTCGACGTATCTGGCAGTGTCGTTAAAGAC 143991 Query 119225 ACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATT 119284 |||||||| || |||| ||| | || |||||| || || || || | Sbjct 143992 GCGAAGCATCGGGATGAGACCGTTCGACGTGCCATTAGTTCCACGGATGTAGCTGTGCGA 144051 Query 119285 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 119344 ||| | || ||| | | | || || || || || ||| ||||| ||||| Sbjct 144052 GGCACGGATTGTGTGTACGCTGAGGCCGATGCCACCAGCGGCCTTGGAGATCAAGGCGCA 144111 Query 119345 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 119404 | | | || || ||||||| || ||||| ||| || | | | || | ||||| Sbjct 144112 TTGCTTTAGGGTGTCGTAGATGCCCTCGATGCTGTCCTCCCTCATCGTGAGCAAAAAGCA 144171 Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 | || | ||| |||| ||| || |||||||||||||| || || ||||| | || Sbjct 144172 GGAAGAGAGTTGCGGCCGCTCTGTGCCGGCGTTGAAGAGAGTGGGGGTGGCGTGAGTAAA 144231 Query 119465 -CATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAA 119523 | | || |||||| | ||||||||| | | | || | ||||||| || || | Sbjct 144232 GTAGAGGTT-GGACATGAGATTGTAGGTCTCAATGGCAGCAGCAATGTCTCCCATATGGA 144290 Query 119524 TACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCC 119583 | ||||| | || ||||| | ||||| ||| || | || | | | || || | | Sbjct 144291 TGCCGATGGCAACTCGCATGATCATGTGTTGAGGCCTCTCAACGATCTTGCCCTCCACCT 144350 Query 119584 TCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATAGCCAAAATCGTAGTCCCGCT 119643 | |||||| ||| ||||||||||||| | ||||| || ||| |||||| || | Sbjct 144351 TGAAGAGGTAGCTCCTCTCCAAGGTCTTAAAGCCAAAGTAAGAGTAATTGTAGTCTCGGT 144410 Query 119644 T 119644 | Sbjct 144411 T 144411 Score = 98.7 bits (108), Expect = 1e-15 Identities = 325/494 (66%), Gaps = 16/494 (3%) Strand=Plus/Plus Query 117839 GAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAA 117898 |||||||||||| ||||| || | |||| |||||| || || | ||||| |||| | Sbjct 142585 GAGGTAGTACATTCCCGTTTTCAATCCCTTCTTCCAAGCGTAAAAGTGCATCGAGGTGAG 142644 Query 117899 CTTGG-AGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGC 117957 ||||| | ||| || | || ||| | ||| | || ||| |||||||| || | Sbjct 142645 CTTGGCAAAGGAGGGGGCCTTG-ATGTGCACGTTGAAGCTCTGGCTCTGATCGATAAA-C 142702 Query 117958 GTCCC-CGATCCGCCGCCATATCAATCACATCCTTCATCTTGATT--TCCCACACAGTCC 118014 | ||| |||||||||||||| || |||| | | | || |||||||| ||| Sbjct 142703 GCCCCTCGATCCGCCGCCATGTCGATCAAGG--TACGTTGGGACACCTCCCACACGGTCT 142760 Query 118015 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCC---G 118071 |||| || |||||||| | || ||||| | | | ||| | || || | Sbjct 142761 TGTACAGCTTCTTAATGTGTTCCGGGATGCAGGCAAGGTGTTGAACAGAGCCGTTGTGAG 142820 Query 118072 CCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCA 118131 || |||| | | ||||| || ||| || || | ||| | || || | || Sbjct 142821 CC---ACCAGTTGGTTCTTCAGCTCGGCGCTCCACAGGCCCAAGTTTCTCAGGTCTTGCA 142877 Query 118132 CGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTG 118190 | || | ||||||| || || || || | | |||| | ||| ||||| ||| Sbjct 142878 TCAAGTGGCTGTTGACAATGGTGAAGTCTCCAGCCAAGATGCGGCG-AGAGTAGATGTTG 142936 Query 118191 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 118250 | ||||| |||||||||||||||||||| || | ||| || | ||||||||||| ||| Sbjct 142937 GAGGTGTAGGGCTCAAAGCACTCATTGTTGCCGAGGATCTGCGAGGTGGAGGCTGTAGGC 142996 Query 118251 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCG 118310 ||||| |||| | | |||||| | || || | ||| | || | ||| || || Sbjct 142997 ATGGGAGCCACCAACAAGCTGTTCCTCAGGCCGTGCTCCTTGATCTTCTGCTTCAGGCCG 143056 Query 118311 TCCCAGTCGTAGTT 118324 ||||||| |||| Sbjct 143057 GCCCAGTCCCAGTT 143070 >seq14654 Length=53260 Score = 143 bits (158), Expect = 3e-29 Identities = 555/856 (65%), Gaps = 27/856 (3%) Strand=Plus/Plus Query 129722 TTGCCATAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTC 129781 ||| |||| || || || ||| ||||||| ||||| ||||| || |||||| ||| | Sbjct 47896 TTGGCATACTCTCCCACGCGCCTCTCGAAAAAGTTGGTCTTGCCTTCCAAGGAGATGAGC 47955 Query 129782 TCCATAAAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAG 129840 ||||| | ||||| |||||| | | ||| | || | || ||| || | || Sbjct 47956 TCCATCCAGTCAAACGGGTTCGTAGCGTTGTAGATCTTCTCGCAG-CCGAGGGCCACCAG 48014 Query 129841 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAG 129900 || || |||| || |||||||||||| |||| ||||| |||||| |||||||| Sbjct 48015 CAGGCGGTCCGCCACAAACTCAATGTACTGGCACATGAGCTCGGCGTTCATGCCGATGAG 48074 Query 129901 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGAT 129960 | ||| || | || | ||| |||| ||||| ||||| || || | || Sbjct 48075 CCTCACTGGAAGGGACTCGCTCACAAACTCCTTTTCAATCTCCACTGCCTCAGCGATAAT 48134 Query 129961 GGCGTGAATGGTCTC--CGTGCCAGG-TCTATTGCGCAAAGTCTTGAAGAGTTCCACGGC 130017 | || ||| | | ||| ||| ||| || | | | ||| |||| ||| Sbjct 48135 --CTTGG-TGGGCACGTCGTTGGAGGGTCTGTTCTGGATCATATTGTAGAGGAGGCAGGC 48191 Query 130018 AAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 130077 ||| || ||| | |||||||| | | ||| | ||||| ||| || || || || Sbjct 48192 AAAGTCACAGTGCATGCCCTCGTCCCTGCTGATCTGCTCATTACTGAAACAAAGTCCAGG 48251 Query 130078 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 130137 ||| || || | |||||||||||| || || || ||||| || |||||||| ||||| || Sbjct 48252 CATAAGGCCTCTCTTCTTCAACCAAAAGATGGCGCAAAAGGAACCAGAGAAAAAGATGCC 48311 Query 130138 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAG-CGGGACTTTGTATCAAACC 130196 ||||||| ||||| || | ||| || | ||||||| | |||| ||| ||| || Sbjct 48312 CTCCACAGCAGCGAAGGCCACGAGCCGGTGAGCAAAGCCGTCGGGGTTTTCTAT----CC 48367 Query 130197 ACTTCATCGCCCACTGCGCCTT-TTTC--TCGATACACGGGACGGTCTGGATCGCTTCAA 130253 |||| || ||||||| || || |||| || || || ||||||| ||| || | | Sbjct 48368 ACTTGATGGCCCACTCAGCTTTCTTTCGGACGGTA---GGCACGGTCTCGATGGCGTTGA 48424 Query 130254 AGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 130313 |||| | ||| || | || || || | ||| | || || || || || | | Sbjct 48425 AGAGGCGGTCCTTCTCCAAGGGGTCCTTCACGTAGGTGTCGATCAGGAGGGAGTACATCT 48484 Query 130314 CGCCATGGACCATTTCATTATGGC--ACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 130371 | |||| | ||| ||||| |||| | ||||||| |||| || ||| || Sbjct 48485 CCGAGTGGATATTCTCA--ATGGCGATCTGAAAGCCGTAGAAGCAGCGAGCCTCGGGTAC 48542 Query 130372 CTGTACCTCATCTGCA--AAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 130429 || ||||| || || || | | ||||| | ||| ||||| || || | Sbjct 48543 TTGCACCTC--CTTCATGAAGCGGACGGCCAAGTTCTCCACAACGATTCCGTCCGAGGCG 48600 Query 130430 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAG 130489 ||||| || ||||||| | | || || | | || | ||| || |||||||| Sbjct 48601 GCAAAGAAGGCCAGGACGTGGGTGATAAAATAGCGCTCGTCCTCAGAGAGCTTCTTCCAG 48660 Query 130490 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTTC 130549 ||| ||||| | | || || |||||||| || ||||| ||| | |||||| Sbjct 48661 TCGGTGAGATCTTGGGCAAGGTCCACCTCCTCGGCGGTCCAGAAGCTGGCCTCGGCCTTC 48720 Query 130550 TTATAGAGTTCCCAGA 130565 || || | ||||||| Sbjct 48721 TTGTACATCTCCCAGA 48736 >seq182 Length=84632 Score = 91.5 bits (100), Expect = 2e-13 Identities = 351/546 (64%), Gaps = 14/546 (3%) Strand=Plus/Minus Query 130049 ATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 130108 ||||| || || ||||| || || ||||| || || | ||||||| |||||| || Sbjct 22274 ATGAGCTCGTTGCTGAAGCTGAGCCCAGGCATCAGCCCTCTTTTCTTCAGCCAGAAGATG 22215 Query 130109 GCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCA 130168 || || || ||||| ||||||||||| || ||||| || || |||| ||| ||| | Sbjct 22214 GCGCAGAAGGAGCCCGAGAAGAAGATGCCTTCCACTGCGGCAAAGGCAATGAGCCGCAGA 22155 Query 130169 GCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATA 130228 ||||| | | | |||| || | ||| || |||||| | ||||| |||| | Sbjct 22154 GCAAAAGCTTGTGGCTTT---TCTATCCAACGCAGCGCCCATTCGGCCTTCTTCTTCACG 22098 Query 130229 CACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTAC 130288 | || || |||| || || | |||||| | ||||||| ||||||| ||| Sbjct 22097 CTAGGCACCGTCTCAATGGCGTTAAAGAGCTTAGCCTTTTCTTTCACGTCTTTGACGTAG 22038 Query 130289 TTATCTATGAGTTTTGAATATGTTTCGCCATGGACCATTTCATTATGGC--ACTGATACG 130346 | || ||||| || || | || |||| ||| ||||| ||| | Sbjct 22037 GTGTCGATGAGCAGCGAGTACATCTCCGAGTGGA--TGTTCTCCATGGCGATTTGAAAGC 21980 Query 130347 CGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGCA--AAATTGTTATTGATATT 130404 ||||||| | || || || | || || || || || || | | | || Sbjct 21979 CGTAGAAGCAACGTGCCTCCGGCAGTTGAACTTC--CTTCATGAAGCGGGCAGCAAGGTT 21922 Query 130405 CTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATATACTTTATGAATTTCTG 130464 ||| | || || ||||| || |||| ||||| |||| | | ||| || || | | Sbjct 21921 CTCCACCACGATGCCATCCGAGGCAGCGAAAAAGGCCAACACGTGCTTGATAAAGTGGCG 21862 Query 130465 TTCATTCTCGTTCAGGGTCT---TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTC 130521 ||| | ||| || | | |||||||| ||| |||| | || ||||||||||| Sbjct 21861 TTCGTCCTCCACAAGCTTGTGGCTCCAGTCGGTAAGGTCCTGCACCAGGTCTACCTCCTC 21802 Query 130522 CGCAGTCCAATTGCTCATTTGAGCCTTCTTATAGAGTTCCCAGAGGTGGGGATACTTCAG 130581 | | |||||| ||| || |||||||| || | |||||| |||| | ||| |||| Sbjct 21801 CACCGTCCAAAAGCTAGCCTGGGCCTTCTTGTACATTTCCCAAAGGTTGTGATGGCTCAG 21742 Query 130582 GGGGAA 130587 ||||| Sbjct 21741 CGGGAA 21736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618321570262440