Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq7184 123 8e-23 seq104 118 3e-21 seq5 113 1e-19 seq53 93.3 1e-13 seq14642 91.5 4e-13 seq6154 89.7 2e-12 seq201 86.0 2e-11 seq10124 84.2 7e-11 seq121 84.2 7e-11 seq52 84.2 7e-11 >seq7184 Length=931 Score = 123 bits (136), Expect = 8e-23 Identities = 155/209 (74%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || ||||| ||||| || || || || || || | || || || || || || | Sbjct 620 CAAG-TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCCTCCA 678 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || ||||||||||| || || |||||||| ||||| || ||||| || ||||| | Sbjct 679 GCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCCTGGA 738 Query 140650 T-TTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTT 140708 | ||| || || ||||| ||||| | ||||| | ||| ||||| | || | ||||| Sbjct 739 TCTTTTGC-TTGACATTTTCAATAGTGTCAGAGGATTCCACTTCCAAGGTGATGGTCTTG 797 Query 140709 CCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || || || || |||||||| Sbjct 798 CCGGTGAGGGTCTTGACGAAGATCTGCAT 826 Score = 111 bits (122), Expect = 5e-19 Identities = 154/212 (73%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 140527 GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTT 140586 || |||| || ||||| ||||| ||||| || || ||||||| || || || || || | Sbjct 161 GACCAAG-TGGAGAGTGGACTCCTTTTGGATGTTGTAATCAGCCAAGGTGCGGCCGTCCT 219 Query 140587 CAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCT 140646 | || || || || || ||||| ||||| ||||| || || ||||| || || || |||| Sbjct 220 CCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCT 279 Query 140647 GAAT-TTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 | || ||| |||| || || || || | || || || ||||| || || | ||| Sbjct 280 GGATCTTTTGCTTC-ACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTGATGGTC 338 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||||| || || || || || |||||||| Sbjct 339 TTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 370 >seq104 Length=38954 Score = 118 bits (130), Expect = 3e-21 Identities = 169/237 (71%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 140501 ATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATT 140560 |||| ||| ||||| || || | || || | || || || ||||| || || || || Sbjct 25734 ATTTAACAG-CCACCTCGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTT 25792 Query 140561 ATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTG 140620 || |||| || || ||||| || || || || || || || ||||| || |||||||| Sbjct 25793 GTAGTCAGCCAAGGTGCGCCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGTTGCTG 25852 Query 140621 ATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGA 140680 ||||||||||| ||||| || ||||| || || || || || || || | ||||| Sbjct 25853 GTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATAGTGTCAGA 25912 Query 140681 TGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || || || | ||||||||||| | || || || || |||||||| Sbjct 25913 AGACTCAACCTCGAGAGTGATAGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 25969 >seq5 Length=69586 Score = 113 bits (124), Expect = 1e-19 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | |||||||||||||| || || || || || || Sbjct 14141 CATACCACCACGGAGGCGAAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTC 14200 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || || || || ||||| | ||||||||| || || Sbjct 14201 GGCGAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGTTGCTGGTCCGG 14260 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || ||||| || || || || || || || | || || | || Sbjct 14261 GGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAAGACTC 14320 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||| || || | |||||||| || || || || || ||||| |||||| Sbjct 14321 CACTTCGAGAGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAAATTTGCATT 14372 >seq53 Length=79819 Score = 93.3 bits (102), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 140535 TGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGT 140594 ||||| || ||||||| || || || || || || || || |||||||| || ||| Sbjct 30317 TGAAGGGTTGACTCTTGCTGGATGTTGTAGTCGAGCAAGGTGCGACCATCTTCGAGCTGT 30258 Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAAT 140650 | ||||| || ||||| || || ||||| |||||||||||||||||||| ||||| Sbjct 30257 ATGCCAGCGAAAATTAGCCGCTGTTGATCCGGAGGAATTCCTTCTTTATCTTGAAT 30202 >seq14642 Length=99085 Score = 91.5 bits (100), Expect = 4e-13 Identities = 161/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||||| || ||||| | | ||||| | || || |||||||| || || || || | Sbjct 59081 TTTACTGTCCGCCACGGAGACGGAGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGT 59140 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 || | || || || | || ||||| || || || ||||| || |||||||| | Sbjct 59141 GGTCGGCCAAGAAGCGGCCGGCCTCCAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGT 59200 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | ||||| || ||||| || || || || || ||| || || ||||| | ||||| | Sbjct 59201 CGGGAGGGATGCCTTCCTTGTCGTGGATCTTCTGTTTGACGTTTTCAATGGTGTCAGACG 59260 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || | ||||||||||| | || || || || |||||||| Sbjct 59261 ACTCGACCTCGAGGGTGATGGTCTTTCCGGTCAAGGTCTTGACGAAGATCTGCAT 59315 >seq6154 Length=1076 Score = 89.7 bits (98), Expect = 2e-12 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| || | | ||||| | || || || ||||| || || || || || || Sbjct 943 CATGCCACCGCGGAGACGAAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 884 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || || || || ||||| | ||||||||||| || Sbjct 883 GGCCAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGG 824 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || ||||| || || || || || || || | || || | || Sbjct 823 GGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGGACTC 764 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || | |||||||| || || || || || ||||| |||||| Sbjct 763 CACCTCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAAATTTGCATT 712 >seq201 Length=21658 Score = 86.0 bits (94), Expect = 2e-11 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || ||||| ||||| ||||| || || || || Sbjct 13771 CATACCACCACGGAGACGAAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTC 13712 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || || || || || || || || || ||||| | ||| ||||| || || Sbjct 13711 GGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGG 13652 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || ||||| || || || || || || || | || || || Sbjct 13651 AGGTATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTC 13592 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || ||||| || | ||||| || || || || || || || || |||||| Sbjct 13591 CACCTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATTTGCATT 13540 >seq10124 Length=657 Score = 84.2 bits (92), Expect = 7e-11 Identities = 70/85 (82%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 74473 AAAATATTGTATGGAGTGGGATTCGAACCCACG--AGTCTTACGACAGTAGAACTTGAGT 74530 ||| | ||| || ||||||||||||||||||| || | || ||||||||||||||| Sbjct 514 AAACTGTTGCATCCAGTGGGATTCGAACCCACGCGAGGATAACCTCAGTAGAACTTGAGT 455 Query 74531 CTACCCCCTTAGACCACTCGGGCAT 74555 ||||| ||||||||| ||||| ||| Sbjct 454 CTACCGCCTTAGACCGCTCGGCCAT 430 >seq121 Length=42921 Score = 84.2 bits (92), Expect = 7e-11 Identities = 70/85 (82%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 74473 AAAATATTGTATGGAGTGGGATTCGAACCCACG--AGTCTTACGACAGTAGAACTTGAGT 74530 ||| | ||| || ||||||||||||||||||| || | || ||||||||||||||| Sbjct 6244 AAACTGTTGCATCCAGTGGGATTCGAACCCACGCGAGGATAACCTCAGTAGAACTTGAGT 6185 Query 74531 CTACCCCCTTAGACCACTCGGGCAT 74555 ||||| ||||||||| ||||| ||| Sbjct 6184 CTACCGCCTTAGACCGCTCGGCCAT 6160 >seq52 Length=88231 Score = 84.2 bits (92), Expect = 7e-11 Identities = 70/85 (82%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 74473 AAAATATTGTATGGAGTGGGATTCGAACCCACG--AGTCTTACGACAGTAGAACTTGAGT 74530 ||| | ||| || ||||||||||||||||||| || | || ||||||||||||||| Sbjct 996 AAATTGTTGCATCCAGTGGGATTCGAACCCACGCGAGGATAACCTCAGTAGAACTTGAGT 1055 Query 74531 CTACCCCCTTAGACCACTCGGGCAT 74555 ||||| ||||||||| ||||| ||| Sbjct 1056 CTACCGCCTTAGACCGCTCGGCCAT 1080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514969030718297