Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq201 141 8e-29 seq7184 134 1e-26 seq11709 127 2e-24 seq629 127 2e-24 seq104 123 2e-23 seq5612 89.7 4e-13 >seq201 Length=21658 Score = 141 bits (156), Expect = 8e-29 Identities = 173/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 26982 TACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAA 27041 ||| | ||||| || || || || || || || |||||| | || |||||||| ||||| Sbjct 13535 TACACAATGCAAATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTTGAGGTGGAG 13594 Query 27042 CCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCC 27101 |||||| | || |||| ||||| || || || || ||||| || |||||||| ||| Sbjct 13595 AGCTCCGACACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATACCTCCC 13654 Query 27102 GATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGAT 27161 || || |||||||| || | ||| ||||| || |||| ||| | ||| | |||| Sbjct 13655 GACCAGCAGCGTTTGATCTTCGCGGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGAC 13714 Query 27162 TACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| ||||||||||| || | || ||||| | ||| | || ||||| || Sbjct 13715 TACAACATCCAAAAGGAGTCCACTCTCCACTTGGTCCTTCGTCTCCGTGGTGGTAT 13770 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || | || |||||| ||||||| | || ||||| || Sbjct 13996 CATGCAGATCTTCGTCAAGACCTTAACTGGCAAGACTATTACCTTGGAGGTGGAGAGCTC 14055 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || |||| ||||| ||||| || || ||||| |||||||| || ||||| || Sbjct 14056 TGACACCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCA 14115 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | ||| ||||| || |||| || | || | | |||||||| Sbjct 14116 GCAGCGCCTCATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGCACTCTCGCTGATTACAA 14175 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| || |||||||| ||| | || ||||| | |||||||| |||||| Sbjct 14176 CATCCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGTTTGCGAGGTGGC 14224 >seq7184 Length=931 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| ||||| ||| | || || || |||||||| ||| Sbjct 370 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACCATCACCCTGGAAGTGGAGAGCTCC 311 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || ||||| || || ||||| || ||||| || ||||| || Sbjct 310 GACACCATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 251 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || |||| ||| | ||| | | ||||||||| Sbjct 250 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCTTGGCTGATTACAAC 191 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||| || | || ||||| | ||| | || || || Sbjct 190 ATCCAAAAGGAGTCCACTCTCCACTTGGTCCTTCGTCTTCGTGGCGG 144 >seq11709 Length=580 Score = 127 bits (140), Expect = 2e-24 Identities = 165/227 (73%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || ||| | ||||| | || ||||| ||| Sbjct 441 ATGCAGATCTTCGTCAAGACCTTGACTGGTAAGACCATTACCTTGGAGGTGGAGAGCTCC 382 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| ||||| || |||||||| || || || || ||||| || Sbjct 381 GACACCATCGAGAACGTCAAGCAAAAGATCCAAGACAAGGAGGGTATTCC-CCCGACCAG 323 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | |||||||||||| |||| ||| || ||| | |||| |||||| Sbjct 322 CAACGCCTGATCTTCGCCGGCAAACAGCTGGAGGACGGTCGCACCCTGGCCGACTACAAC 263 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||| ||| | || ||||| | ||| | || ||||| Sbjct 262 ATCCAGAAGGAGTCTACCCTCCACTTGGTCCTCCGTCTCCGCGGTGG 216 >seq629 Length=7623 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || |||||| | || ||||| || || || | || Sbjct 3737 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTCGAGTCTTCT 3796 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || || || ||||| |||||||| || ||||| || Sbjct 3797 GACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 3856 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | ||||||||| || |||| ||| || || | | ||||||||| Sbjct 3857 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACTCTCGCTGATTACAAC 3916 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||| | || ||||| | ||| | | || ||||| Sbjct 3917 ATCCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGTCTTAGAGGAGGCAT 3966 >seq104 Length=38954 Score = 123 bits (136), Expect = 2e-23 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 26982 TACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAA 27041 ||| | ||||| || || || || || || || || ||| | || ||| | || ||||| Sbjct 26431 TACACAATGCAAATCTTCGTCAAGACCCTCACTGGTAAGACAATCACTTTGGAGGTGGAG 26372 Query 27042 CCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCC 27101 |||||| | || |||| || || ||||| || || ||||| |||||||| || || Sbjct 26371 AGCTCCGACACCATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAAGGCATTCCCCCT 26312 Query 27102 GATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGAT 27161 || || ||||| | || | ||||||||| || |||| ||| | ||| | |||| Sbjct 26311 GACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCTTGGCCGAC 26252 Query 27162 TACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| ||||||||||| || | || ||||| | ||| |||| ||||| || Sbjct 26251 TACAACATCCAAAAGGAGTCCACTCTCCACTTGGTCCTCCGTCTGCGCGGTGGTAT 26196 >seq5612 Length=1165 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 27066 AAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCC 27125 ||||| || || ||||| || || ||||| || ||||| || |||||| | || | ||| Sbjct 1165 AAACAGAAGATACAAGATAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTCATCTTCGCA 1106 Query 27126 GGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACC 27185 ||||| || |||| ||| | ||| | |||| |||||||| ||||||||||| ||| Sbjct 1105 GGCAAGCAGCTGGAGGACGGCCGCACCTTGGCCGACTACAACATCCAAAAGGAGTCCACC 1046 Query 27186 TTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || |||| | ||| || |||| || || Sbjct 1045 CTCCACCTGGTCCTTCGTCTGAGGGGAGGTAT 1014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434838489180480