Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1075 114 1e-20 seq3021 111 1e-19 seq201 111 1e-19 seq7184 107 2e-18 seq14642 105 6e-18 seq629 105 6e-18 seq4150 93.3 4e-14 seq294 93.3 4e-14 seq104 93.3 4e-14 >seq1075 Length=2391 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | || | ||||| || || ||| ||| || || || || || || Sbjct 1451 CATGCCTCCCCTCAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 1392 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 ||| || || || |||| || ||||| ||||| ||||| || || ||||||||||||| Sbjct 1391 GGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGG 1332 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 ||| | || ||| |||||| ||| ||||| |||| || | | || ||| ||| Sbjct 1331 GGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTC 1272 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| |||| ||||| | || || || || || || || || |||||||| Sbjct 1271 CACCTCCAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATTTGCAT 1221 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| ||| || || || || || ||||| || || || |||| || Sbjct 1657 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGACCGTCCTCC 1598 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 || || || ||||| || || | ||||||||||||| || | | ||| ||||| | Sbjct 1597 AGTTGCTTACCCGCGAAGATCAATCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCTTGG 1538 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || || || | || | | ||||| ||||| || || | ||||| |||| Sbjct 1537 ATCTTTTGCTTCACGTTCTCAATAGTATCAGAAGACTCGACCTCAAGAGTGATGGTTTTG 1478 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||| || ||||| ||||| ||||| Sbjct 1477 CCAGTCAAGGTCTTAACGAAGATCTGCAT 1449 >seq3021 Length=1716 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || |||||||| || || ||| ||| || || || || || ||||| | || || || Sbjct 1 CGCAACACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCG 60 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||| ||||| || || || ||||||||||| |||| ||| | | ||| || Sbjct 61 TCCTCCAGCTGCTTGCCAGCGAAAATCAGACGCTGCTGATCGGGGGGGATTCCCTCCTTA 120 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 ||| ||| || || || | || | | || ||| |||||||| || | |||||| Sbjct 121 TCCTGGATCTTTTGCTTCACATTCTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATA 180 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTT 39288 |||| || || ||||| || || ||||| |||||| || Sbjct 181 GTTTTGCCTGTGAGCGTCTTCACGAAGATCTGCATCCTT 219 >seq201 Length=21658 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| ||| ||||| || || || ||||| || || || |||| || Sbjct 13749 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCC 13690 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| |||||||| || || | |||||||||||||| || | || ||| |||||| | Sbjct 13689 AGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCGGGAGGTATGCCCTCCTTGTCCTGG 13630 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || ||||| |||| || | | || ||| |||||| || | ||||| | || Sbjct 13629 ATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTG 13570 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || ||||||||||| Sbjct 13569 CCAGTGAGGGTCTTCACGAAGATTTGCAT 13541 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | || | ||||| || || ||| ||| || || || || || || Sbjct 13999 CATGCCTCCCCTCAGACGAAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 13940 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 ||| || || || |||| || | ||| ||||| || || || || ||||||||||||| Sbjct 13939 GGCGAGGGTGCGGCCGTCCTCCAACTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGG 13880 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 || | || || |||||| ||| ||||| |||| || | | || ||| ||| Sbjct 13879 AGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTTCTCGATGGTGTCGGAGCTCTC 13820 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| |||| || ||| | || || || || || || || ||||| ||||| Sbjct 13819 CACTTCCAGGGTAATAGTCTTGCCGGTAAGAGTCTTGACGAAGATCTGCAT 13769 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 39056 AGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGG 39115 |||| |||| || || | ||||| || || ||| ||| || || || || ||||| | Sbjct 14225 AGCCACCTCGCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAG 14166 Query 39116 CAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGG 39175 | || || || | || || ||||| |||||||| || || || ||||||||||||| || Sbjct 14165 CGAGAGTGCGGCCATCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGGG 14106 Query 39176 GCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACT 39232 | | || || |||||| ||| || || |||| || | | || || ||| || Sbjct 14105 GAATGCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTCTCGATGGTGTCAGAGCT---CT 14049 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| |||| || ||| | || || || | || || || ||||| ||||| Sbjct 14048 CCACCTCCAAGGTAATAGTCTTGCCAGTTAAGGTCTTGACGAAGATCTGCAT 13997 >seq7184 Length=931 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| ||| ||||| || || ||||| || | || || |||| || Sbjct 162 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAATCAGCCAAGGTGCGGCCGTCCTCC 221 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || |||||||||||||||| ||| | || ||| |||||| | Sbjct 222 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGG 281 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || || || | || | | || ||| |||||| |||| ||||| | ||| Sbjct 282 ATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACTTCCAGGGTGATGGTCTTT 341 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || ||||| ||||| Sbjct 342 CCGGTAAGAGTCTTGACGAAGATCTGCAT 370 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || |||||||| || || ||| ||| || || || || || ||||| | || || | Sbjct 384 CGCAACACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGACCA 443 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||| ||||| || || || || ||||||||||||| ||| | || ||| ||| Sbjct 444 TCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTG 503 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 ||| ||||||||| || | || | | || ||| |||||| |||| || || Sbjct 504 TCCTGGATTTTCTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTAATG 563 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || |||| || ||||| ||||| ||||| Sbjct 564 GTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCAT 598 >seq14642 Length=99085 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | || | ||||| || || ||| ||| || || || || || || Sbjct 59313 CATGCCTCCCCTCAGACGAAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTC 59372 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 ||| | || || |||| || ||||| ||||| ||||| || || ||||||||||| | Sbjct 59373 GGCCAAGGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCAGG 59432 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 ||| | || || |||||| ||| || || |||| || | | || ||| ||| Sbjct 59433 GGGAATGCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTCTCGATGGTGTCGGAGCTCTC 59492 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || | ||||| | |||||||| || || || || ||||||||||| Sbjct 59493 CACCTCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAGATTTGCAT 59543 >seq629 Length=7623 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||||||||| | || | ||||| || || ||| ||| || || || || ||||| Sbjct 3967 CATGCCTCCTCTAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATC 3908 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 || || || || |||| || ||||| ||||| || || || | |||||||||||||| Sbjct 3907 AGCGAGAGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGGTCGGG 3848 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 ||| | || || |||||| ||| ||||| || | || | | || || ||||| Sbjct 3847 GGGAATGCCTTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCAGAAGACTC 3788 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||| ||||| | || || || || || || || || |||||||| Sbjct 3787 GACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 3737 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || || ||||| || || ||| ||| || || || || || ||||| || || || || Sbjct 4179 CGCAAGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCG 4120 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||| ||||| || || || | ||||||||||| | ||| | | ||| ||| Sbjct 4119 TCCTCCAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGGGGAATACCCTCCTTG 4060 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 ||| || ||||| |||| | | | || || || ||||| |||| ||||| Sbjct 4059 TCCTGAATCTTCTGCTTGACATTTTCAATGGTGTCAGAGGATTCCACCTCCAGGGTGATG 4000 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || || || || || ||||| ||||| Sbjct 3999 GTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 3965 >seq4150 Length=1450 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || || ||| || || || || || ||||| || || || |||| || Sbjct 7 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTACGACCGTCCTCC 66 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| |||||||| || || | || ||||| |||| ||| | || ||| |||||| | Sbjct 67 AGCTGCTTGCCCGCGAAGATCAAGCGTTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGG 126 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || ||||| || | || | | || || |||||||| || | ||||| | || Sbjct 127 ATCTTCTGCTTCACGTTCTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTG 186 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || ||||||||||| Sbjct 187 CCAGTGAGGGTCTTGACGAAGATTTGCAT 215 >seq294 Length=52215 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | || | || | || || ||| ||| || || ||||| ||||| Sbjct 28954 CATGCCTCCCCTCAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGAATATTGTAATC 29013 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 || || || || |||| || || || ||||| || || || | ||||||||||| | Sbjct 29014 AGCGAGGGTACGGCCGTCCTCCAGTTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGG 29073 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 ||| | | ||| |||||| ||| ||||| || | || | | || || ||||| Sbjct 29074 GGGAATACCCTCCTTGTCCTGGATCTTCTGCTTCACGTTCTCGATGGTGTCCGAGGACTC 29133 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || | ||||| | |||||||| || || || || || |||||||| Sbjct 29134 CACTTCGAGGGTGATGGTCTTTCCCGTGAGGGTCTTGACGAAAATTTGCAT 29184 >seq104 Length=38954 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| ||| ||||| || || || ||||| | || || |||| || Sbjct 26217 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCCTCC 26276 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || || ||||||||||| | ||| | || || |||||| | Sbjct 26277 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGG 26336 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || || || | || | | || ||| |||||| |||| ||||| | || Sbjct 26337 ATCTTTTGCTTCACGTTCTCGATGGTGTCGGAGCTCTCCACCTCCAAAGTGATTGTCTTA 26396 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || ||||||||||| Sbjct 26397 CCAGTGAGGGTCTTGACGAAGATTTGCAT 26425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429468649456187