Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balamuthia_20mandrillaris_20[genbank_20GCA_5F001262475.1_202015-08- 05] 14,699 sequences; 44,270,879 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq294 132 3e-26 seq5 132 3e-26 seq629 123 2e-23 seq14642 118 7e-22 seq1590 114 9e-21 seq7184 113 3e-20 seq104 113 3e-20 seq1075 105 5e-18 seq5330 100 2e-16 seq481 87.8 1e-12 seq201 86.0 4e-12 >seq294 Length=52215 Score = 132 bits (146), Expect = 3e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||| || |||||||||||||| || ||||| |||||||| || ||| | Sbjct 29185 AATGCAAATTTTCGTCAAGACCCTCACGGGAAAGACCATCACCCTCGAAGTGGAGTCCTC 29126 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || | | || || || || ||||| || ||| | || || || || Sbjct 29125 GGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCA 29066 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || || |||||||| |||||||| |||| || || | | |||||||| Sbjct 29065 GCAGCGCTTGATCTTCGCCGGCAAGCAACTGGAGGACGGCCGTACCCTCGCTGATTACAA 29006 Query 23790 CATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 29005 TATTCAGAAGGAGTCCAC 28988 >seq5 Length=69586 Score = 132 bits (146), Expect = 3e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||| || |||||||||||||| || |||||||||||||| || || | Sbjct 14372 AATGCAAATTTTCGTCAAGACCCTCACGGGAAAGACCATCACTCTCGAAGTGGAGTCTTC 14313 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || | | || || || || ||||| ||||| | || || || || Sbjct 14312 GGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCA 14253 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||||| || || |||||||| || ||||| |||| ||||| | | ||| ||||| Sbjct 14252 GCAACGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTCGCCGACTACAA 14193 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 14192 CATCCAGAAGGAGTCTAC 14175 >seq629 Length=7623 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||| || |||||||| || || || |||||||| || || || || | Sbjct 3736 AATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTCGAGTCTTC 3795 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || || ||||| ||||| | || || || || Sbjct 3796 TGACACCATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCA 3855 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||||| || || |||||||| || ||||| |||| |||||| | | |||||||| Sbjct 3856 GCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACTCTCGCTGATTACAA 3915 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 3916 CATCCAGAAGGAGTCCAC 3933 >seq14642 Length=99085 Score = 118 bits (130), Expect = 7e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || ||||| || |||||||||||||| || ||||| ||||| || || | | Sbjct 59544 AATGCAAATCTTCGTCAAGACCCTCACGGGAAAGACCATCACCCTCGAGGTGGAGAGCTC 59485 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || ||||| || ||||| ||||| | || || || || Sbjct 59484 CGACACCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 59425 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || ||||||||||| || ||||| |||| || || || | ||| ||||| Sbjct 59424 GCAGCGCCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGTACCTTGGCCGACTACAA 59365 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 59364 CATCCAGAAGGAGTCCAC 59347 >seq1590 Length=2191 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| ||||||| || |||||||||||||| || || || |||||||| || || | Sbjct 342 AATGCAAATTTTCGAGAAGACCCTCACGGGAAAGACCATTACCCTCGAAGTGGAGTCATC 283 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || || ||||| ||||| | || || || || Sbjct 282 CGACACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCA 223 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || || | || || ||||| || ||||| || |||| ||||| || | ||| ||||| Sbjct 222 GCAACGCCTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCTTGGCCGACTACAA 163 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || |||||||| | || || ||| | | |||| ||||| Sbjct 162 CATCCAGAAGGAGTCCACCCTCCACTTGGTTCTTCGTCTGCGGGGAGG 115 >seq7184 Length=931 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || || ||||| || ||||| || ||||| || | | Sbjct 370 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACCATCACCCTGGAAGTGGAGAGCTCC 311 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || ||||| || ||||| || || | || || || || Sbjct 310 GACACCATCGAGAACGTGAAGCAAAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 251 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || |||||||| || ||||| |||| ||||| || | ||||||||| Sbjct 250 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCTTGGCTGATTACAAC 191 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| |||||||| Sbjct 190 ATCCAAAAGGAGTCCAC 174 >seq104 Length=38954 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||| | || ||||| || ||||||||||| ||||| || | Sbjct 25969 ATGCAGATCTTCGTCAAGACCTTGACCGGAAAGACTATCACTCTCGAGGTTGAGTCTTCT 25910 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | || || || || ||||| ||||| | || || || || Sbjct 25909 GACACTATCGAGAACGTGAAGCAGAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 25850 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || | || || || ||||| || ||||| |||| ||||| || | || |||||| Sbjct 25849 CAACGCCTGATCTTCGCGGGCAAGCAGCTGGAGGACGGGCGCACCTTGGCTGACTACAAC 25790 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || |||||||| | || || || | | |||||||| || Sbjct 25789 ATCCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGTTTGCGAGGTGG 25743 >seq1075 Length=2391 Score = 105 bits (116), Expect = 5e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||| || |||||||| || || || |||||||| || || || | | Sbjct 1220 AATGCAAATTTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTGGAGGTGGAGAGCTC 1279 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || || ||||| || || | || || || || Sbjct 1280 CGACACCATCGAGAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCA 1339 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || ||||||||||| || ||||| |||| ||||| | | ||| ||||| Sbjct 1340 GCAGCGCCTCATCTTTGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGACTACAA 1399 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 1400 CATCCAGAAGGAGTCCAC 1417 >seq5330 Length=1214 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||| |||||||| || |||||||||||||| || |||||||| || || || || Sbjct 870 AAAATGCAAATTTTCGTCAAGACCCTCACGGGAAAGACCATCACTCTTGAGGTCGAGTCT 811 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || ||| | || | | || ||||| || ||||| || || | || || || Sbjct 810 TCCGATACTATCGAGAACGTGAAGCAAAAGATCCAAGACAAGGAGGGCATCCCTCCCAAT 751 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || || | || | || ||||| || ||||| |||| | |||| ||| |||||| Sbjct 750 CAGCAACGACTGATCTCCGCGGGCAAGCAGCTGGAGGACGGCCACACTCTAGCTGATTAC 691 Query 23788 AACATACAAAAAGAGTCCAC 23807 || || | || ||||| || Sbjct 690 AATATCCTGAAGGAGTCTAC 671 >seq481 Length=39991 Score = 87.8 bits (96), Expect = 1e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 23711 AAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAAC 23770 ||||| | || || ||||| || ||| | || ||||||||||| || || || |||| || Sbjct 9351 AAGGTATCCCCCCTGATCAGCAACGTCTTATCTTTGCCGGCAAGCAGCTCGAGGACGGAC 9292 Query 23771 GCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGC 23830 | || | | ||| |||||||| || || |||||||| | || || || || |||||| Sbjct 9291 GTACCCTCGCCGACTACAACATCCAGAAGGAGTCCACTCTCCACTTGGTGTTGAGGTTGA 9232 Query 23831 GAGGAGGA 23838 | |||||| Sbjct 9231 GGGGAGGA 9224 >seq201 Length=21658 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||| | || || || || || || | || || || | | Sbjct 13997 ATGCAGATCTTCGTCAAGACCTTAACTGGCAAGACTATTACCTTGGAGGTGGAGAGCTCT 14056 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || ||||| || ||||| ||||| | || || || || Sbjct 14057 GACACCATCGAGAACGTCAAGCAAAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 14116 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || || ||||| || ||||| || | |||||| | | ||||||||| Sbjct 14117 CAGCGCCTCATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGCACTCTCGCTGATTACAAC 14176 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || |||||||| | || || || | | |||||||| || Sbjct 14177 ATCCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGTTTGCGAGGTGG 14223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337949047587092