Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1299 109 1e-18 seq641 109 1e-18 seq211 109 1e-18 seq206 109 1e-18 seq127 109 1e-18 seq77 109 1e-18 seq1457 107 4e-18 seq70 107 4e-18 seq41 86.0 1e-11 >seq1299 Length=5507 Score = 109 bits (120), Expect = 1e-18 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 3370 TGCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAG 3311 Query 165769 CCCCACGATGGGC 165781 |||| || ||||| Sbjct 3310 CCCCCCGTTGGGC 3298 >seq641 Length=13309 Score = 109 bits (120), Expect = 1e-18 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 3953 TGCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAG 3894 Query 165769 CCCCACGATGGGC 165781 |||| || ||||| Sbjct 3893 CCCCCCGTTGGGC 3881 >seq211 Length=34795 Score = 109 bits (120), Expect = 1e-18 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 19934 TGCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAG 19875 Query 165769 CCCCACGATGGGC 165781 |||| || ||||| Sbjct 19874 CCCCCCGTTGGGC 19862 >seq206 Length=29238 Score = 109 bits (120), Expect = 1e-18 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 4119 TGCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAG 4060 Query 165769 CCCCACGATGGGC 165781 |||| || ||||| Sbjct 4059 CCCCCCGTTGGGC 4047 >seq127 Length=49074 Score = 109 bits (120), Expect = 1e-18 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 27895 TGCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAG 27836 Query 165769 CCCCACGATGGGC 165781 |||| || ||||| Sbjct 27835 CCCCCCGTTGGGC 27823 >seq77 Length=45742 Score = 109 bits (120), Expect = 1e-18 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 37271 TGCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAG 37212 Query 165769 CCCCACGATGGGC 165781 |||| || ||||| Sbjct 37211 CCCCCCGTTGGGC 37199 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/71 (92%), Gaps = 1/71 (1%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTC-GTGGGTTCGA 165767 |||||| ||||||||||||||||||||||||||| |||||||||||||| | |||||||| Sbjct 37704 TGCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGGTTCGA 37645 Query 165768 GCCCCACGATG 165778 ||||| || || Sbjct 37644 GCCCCCCGTTG 37634 >seq1457 Length=3165 Score = 107 bits (118), Expect = 4e-18 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 2962 GCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAGC 2903 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 2902 CCCCCGTTGGGC 2891 >seq70 Length=51268 Score = 107 bits (118), Expect = 4e-18 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 27619 GCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAGC 27560 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 27559 CCCCCGTTGGGC 27548 >seq41 Length=55081 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 281553 TCTTTGGGATTATAACTGGGAATGTTAGTAGACCAACCGGTTCCAATACCACTTGAACCA 281612 ||| | ||||||||| | ||||| || | |||||||| || || |||||| ||||| Sbjct 23042 TCTCTTGGATTATAATTTGGAATTGTACTTGACCAACCTGTACCTATACCAACACAACCA 23101 Query 281613 TTTACCAAAATACTCGGGATAATAGGTACATAACATTCTGGTTCAATTTTATCACCATCA 281672 ||||||||||| | || || | || ||||| ||| ||||| || ||| | ||||||| Sbjct 23102 TTTACCAAAATCATTGGAATCACTGGAACATAGAATTTTGGTTGAACTTTTTTACCATCA 23161 Query 281673 TC 281674 || Sbjct 23162 TC 23163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057799983428360