Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq319 158 1e-33 >seq319 Length=25483 Score = 158 bits (174), Expect = 1e-33 Identities = 1132/1789 (63%), Gaps = 92/1789 (5%) Strand=Plus/Minus Query 36834 ATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTT 36893 ||| ||||| ||||| |||| || |||||| ||| ||||||||| ||| ||||| Sbjct 8395 ATAGTACATACCAGTCTTTAAACCTTTCCTCCATGAGTAGAAATGCATAGAGGTGAGTTT 8336 Query 36894 TGCGTATGTAGGATTATCTAT--ATATATTGTCATTGATTGACTTTGATCTATAAACGCA 36951 || | || || | | || | | |||| | | ||| |||||||| || || ||| Sbjct 8335 GGCAAAGGTTGGTTCTGCAATGAAAACATTGAAACT--TTGGCTTTGATCGATGAAAGCA 8278 Query 36952 CCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATAT 37011 || | || || ||||| || | | | | ||||| || |||||||| |||||||| Sbjct 8277 CCACGATCAGCGGCCATATCAATGAGAGTTCTTTGACGAATTTCCCAAACAGTTTTATAG 8218 Query 37012 ATTTGTTTTATATTATCTGGTAAATCTA-AATG--TTGAATAGAACCA--TTATGTAACA 37066 | || ||| | | ||| || | | |||| |||||| |||||| | || || Sbjct 8217 AGTTCTTTCAATTCATCAGGGATGCCACCAATGGATTGAATGGAACCACGTGCTGCAATG 8158 Query 37067 CAATTGTATTCTTTATGTCATTATTCCACATATTTCTACTT-ATTAGTTCTCTCAA-TAG 37124 ||| ||||| || || |||| ||| | ||| || || || ||| | || Sbjct 8157 --ATTTGGTTCTTCATCTCTGGTGTCCAAATACC-CAACTCCATGAGATC-CTCTAGTAA 8102 Query 37125 GTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGT 37184 ||| ||| |||| || || |||| ||| || | | | || ||||| ||| Sbjct 8101 TTGTTTATTGACAATTGTGAATTCACCAGCTAAAACACGACGACTGTAAATATTTGAAGT 8042 Query 37185 ATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGG 37244 |||||||||| | ||||| |||| | |||||| ||| || || || |||||||| Sbjct 8041 GTATGGTTCAAAACATTCATTGTTACCAAGGATTTGACTTGTTGAAGCGGTTGGCATTGG 7982 Query 37245 TGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTT---TTAGTTCATT 37301 ||| |||| || || | || ||| | |||| | |||| | ||| ||| | Sbjct 7981 TGCAATTAAGAGTGAGTTACGTAAACCACCTTTATTGACGATCTTATCCTTTAATTCTGT 7922 Query 37302 CCAATCCCA---TAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTT 37358 ||||| ||| | || || || || ||||||||||||||| || |||||||| Sbjct 7921 CCAATTCCAACGTGAACTTGGTGTAACATT---CCACATATCATATTGAAGGATACCTTT 7865 Query 37359 ACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACT 37418 | ||||| || | | | | |||||||| || | | || | ||| | Sbjct 7864 AGAAGCTGGTGAGCCTTGGAAAGATTCATAAGGACCATCACGAACGGCCAATTCATGAGA 7805 Query 37419 AGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTC 37478 | | || || || |||| || ||||| |||| | ||||||| | || | Sbjct 7804 GGCTGTTAAAGCAGCGAAATAAATGGTTTCAGCGATTTCAACATTTAATTTGGCAGCGGC 7745 Query 37479 TTCGCTATCGAATG-CATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGA 37537 | |||||||| | |||| | || | || || ||||| || ||||| |||| ||| | Sbjct 7744 AACACTATCGAAAGGCATA-CGCATTTTAATGAAAACATCTGCTAAACCTTGAATACCAA 7686 Query 37538 TACCTATGGGTCTATGTTTCTTATTAGA---TCTAGACGATTCTATCACTGGATAATAAT 37594 |||| || || | |||| | ||| || | ||| | || || ||||||||||| | Sbjct 7685 TACCAATTGGACGATGTCTAAGATTTGAGGTTTTAGCC---TCGATAACTGGATAATAGT 7629 Query 37595 TGATATCTATTATTTTATTTAGATTT-------TTAACTAG-TATTTTC-----GTAATT 37641 | ||| || || ||| |||||| |||| | | | |||| | |||| Sbjct 7628 TACGATCAATGATAACATTAAGATTTACTGTGATTAATTTGGTGATTTCAAAGAGGAATT 7569 Query 37642 -ATTCTCAA---------CTTGTCGAACA--TAAA--TACGTTATTATTAACAAATTTAC 37687 || |||| ||| | || | || | | || | | || ||||| Sbjct 7568 GATGGTCAAATTCAAACTCTTTTGGATTGGTTGAACCTGCTTTTTGACGAATGAATTTTG 7509 Query 37688 TCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTAC-TAAATTGTATA 37746 | | ||||| | |||||||| || |||| ||||||| || | || |||| || Sbjct 7508 GAAGTGCGATAGAGGCGAGATTACAAACGGCAATTTCATCTG-GTGATGTATATTGAATG 7450 Query 37747 ATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTA 37806 || |||||||| |||||||| ||||| || || ||||| ||||||||||||| | Sbjct 7449 ATTTCTGTACAAAGATTACTACTACTAATGGTACCTAAATTCTTTTGATTGGATTTGGCA 7390 Query 37807 TTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATA 37866 || |||| ||| ||||| | || | || || || ||| | ||||| || ||||| Sbjct 7389 TTGCAAGCATCCTTATACAAGATGAATGGTGTACCAGTTTCAACTTGAGATTCCATAATG 7330 Query 37867 GATTTCCATAAACTTCTTG--CTTTAACGAT-CG-CTT--TAAtttttttCTTTGTTTCG 37920 | ||| | | ||||| |||||| || || ||| || | | | | ||| Sbjct 7329 GCGAACCAAAGA--TCTTGAGCTTTAATTATACGTCTTGGTAGGCCTGGTGTG-GCTTCA 7273 Query 37921 TATTCTATATATA-------AT-TTGTTAAAA-TCATTCCCCCATACATCGCATAATCCT 37971 |||| | || | || ||||| | | | | | | || ||| | ||| Sbjct 7272 TATTTCAAGTAGAGAGCACGATGTTGTTCAGAGTGAGT------TTCA--GCAAGA-CCT 7222 Query 37972 GGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAAT 38031 || |||| |||||| | |||| ||| || ||| || ||| || || |||||||| Sbjct 7221 GGTGCTTCGTTTGGACAAAAGAGAGCCCAATCACCATTTTGTTCGACACGCTCCATAAAG 7162 Query 38032 AAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACA 38091 | |||| ||||| | ||| || | ||| | | ||| || || || || Sbjct 7161 ATATCACTGACCCAAAGGGCATAGAAAAGGTCTCTAGCTCTCATCTCCTCTTTACCAGTG 7102 Query 38092 TTCTTTCTTAAGCTTAGAAAAT-CGAATATATCAGCGTGCCATGGTTCTATATAAATCGA 38150 || |||||| || | | ||| | || | ||| ||||||||||| || | |||| | Sbjct 7101 TT-TTTCTTGAGATCAATGAATTCAAAGACATCGGCGTGCCATGGCTCCAAGTAAACGGC 7043 Query 38151 CATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATAT 38210 | || ||| ||| || |||| || |||| | || | | | || | ||| | | Sbjct 7042 AAAGGCACCTTTTCTCTTGCCACCACCTTGATCGACGTAACGAGCAGTATCATTGAAAAC 6983 Query 38211 TCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTT 38270 | | ||| ||||| | |||||| | || || |||| |||||| | Sbjct 6982 ACGAAGCATTGGTACCAAACCATTGCTAGTACCATTGGTACCACGAATATAACTTTGAGC 6923 Query 38271 AGCTCGTATATTACTTATCGACAAT-CCTATTCCACCTGCATGTTTTGATATTAAAGCGC 38329 ||| || || ||| | | || |||| || || ||||| ||| ||||| || | |||| Sbjct 6922 AGCACGAATTTTA-TGAACGGCAATACCAATACCACCAGCACTCTTTGAGATGAGTGCGC 6864 Query 38330 ATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAAC 38389 ||||||| || ||||| | ||||| || || || || || ||| | | || |||| Sbjct 6863 ATTGTTTCAAGGTATCGTAGATACCATCGATTGAATCCTCTTTCATTTGAACTAAGAAAC 6804 Query 38390 AACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGA 38449 || ||||||||| || |||| || || || || ||||| || || | ||||| ||| Sbjct 6803 AAGAAGACATTTGTGGTGATGGTGTACCTGCATTGAATAAGGTTGGTGTGGCATGAGTGA 6744 Query 38450 ACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAA 38509 | |||| || || ||| || ||||| | || || ||| || || |||| || | Sbjct 6743 ATAATTTCTCTGATAAACGTTTGTATGTGTTGATAGCAGAATCAATGTCTTCGCCATGGA 6684 Query 38510 TACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTT 38558 |||| | || || | ||| | ||| |||||||| | ||| | ||||| Sbjct 6683 TACCAATTGAAACACGCATCAACATGTGTTGTGGACGTTCGACGATTTT 6635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468514422175680