Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq319 307 2e-78 >seq319 Length=25483 Score = 307 bits (340), Expect = 2e-78 Identities = 1179/1820 (65%), Gaps = 76/1820 (4%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||||||||| | | | | || || ||||| ||||||||||| || || |||| | Sbjct 8433 GTGAATTGAATAGCATCAGCGGCTGGACGAGTACGGAGATAGTACATACCAGTCTTTAAA 8374 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || |||||| ||||||||||||| || ||||||| | | | || ||||| || Sbjct 8373 CCTTTCCTCCATGAGTAGAAATGCATAGAGGTGAGTTTGGCAAAGGTTGGTTCTGCAATG 8314 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 | ||| | | ||| |||||||||||||| || || | || || ||||| | ||| Sbjct 8313 AAAACATTGAAACTTTGGCTTTGATCGATGAAAGCACCACGATCAGCGGCCATATCAATG 8254 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 | || |||| |||||||||||| ||||||||| | | || | || || || | | Sbjct 8253 AGAGTTCTTTGACGAATTTCCCAAACAGTTTTATAGAGTTCTTTCAATTCATCAGGGATG 8194 Query 78958 TT-----TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCAT 79012 || ||| ||||||| |||| |||| || || ||||| |||||| Sbjct 8193 CCACCAATGGATT--GAATGGAACCACGTGCTGCAATGATTTGGTTCTTCATCTCTGGTG 8136 Query 79013 TCCATAATTTTCT-CTCGGTTAAAAC-TCTAAGGAGATGCGGATTAACTACTTGAAATTC 79070 |||| ||| | ||| | | | | |||| | | || ||| || | | ||||| Sbjct 8135 TCCA-AATACCCAACTCCATGAGATCCTCTA-GTAATTGTTTATTGACAATTGTGAATTC 8078 Query 79071 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATT 79130 |||| || || | ||| |||||||||| || |||||||| | ||||||| || Sbjct 8077 ACCAGCTAAAACACGACGACTGTAAATATTTGAAGTGTATGGTTCAAAACATTCATTGTT 8018 Query 79131 TCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAG 79190 || | |||||| ||||| || |||||||| ||||| | || | || | | Sbjct 8017 ACCAAGGATTTGACTTGTTGAAGCGGTTGGCATTGGTGCAATTAAGAGTGAGTTACGTAA 7958 Query 79191 ACCG----TATGATCTGATTTTATCTTTTAGAGATTC---CCAATCCCAAAGATCAGACG 79243 ||| ||| | ||| ||||| |||| |||| ||||| |||| | | | Sbjct 7957 ACCACCTTTATTGAC-GATCTTATCCTTTA---ATTCTGTCCAATTCCAACGTGAACTTG 7902 Query 79244 GGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATG 79303 | ||||||||| | ||||||||| || ||||| ||| ||| ||| ||| | | | Sbjct 7901 GTGTAACATTCCACATATCATATTGAAGGATACCTTTAGAAGCTGGTGAGCCTTGGAAAG 7842 Query 79304 TTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAA 79363 ||||||||| || || |||| |||||| | || ||| || || |||||| Sbjct 7841 ATTCATAAGGACCATCACGAACGGCCAATTCATGAGAGGCTGTTAAAGCAGCGAAATAAA 7782 Query 79364 TGGTTTCGAAAATCTTCTTATTGAGATCTTGT-GCTTCTAGGCTATCAAATGG-ATA--- 79418 ||||||| || | ||| | || | | || | | ||||| || || ||| Sbjct 7781 TGGTTTCAGCGATTTCAACATTTA-ATTTGGCAGCGGCAACACTATCGAAAGGCATACGC 7723 Query 79419 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 79478 |||| | ||| | | |||||||| ||||||| ||||||||| || || | |||||| Sbjct 7722 ATTTTAATGAAAACA----TCTGCTAAACCTTGAATACCAATACCAATTGGACGATGTCT 7667 Query 79479 CTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAG 79538 ||| || ||| ||| || || |||||||| ||| ||| || || ||| || Sbjct 7666 AAGATTTGAGGTTTTAGCCTCGATAACTGGATAATAGTTACGATCAATGATAACATTAAG 7607 Query 79539 ATTC-CTGACTATTACTTTGACCACATCCTTTAGT--TTGAG----AAAATCAAA----- 79586 ||| ||| |||| |||| | || || |||| ||| ||||| Sbjct 7606 ATTTACTGTG-ATTAATTTGGTGATTTCAAAGAGGAATTGATGGTCAAATTCAAACTCTT 7548 Query 79587 ------TCGT----CCATCTATT--ACAAAC--ATGTTCAACG--CGACAGATGCCAGAT 79630 | || || || || || || || || | | ||| ||| || |||| Sbjct 7547 TTGGATTGGTTGAACCTGCTTTTTGACGAATGAATTTTGGAAGTGCGATAGAGGCGAGAT 7488 Query 79631 TACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTAC 79690 |||||||||| | |||| | | |||||| || ||||| || || || ||||||| Sbjct 7487 TACAAACGGCAATTTCATCTGGTGATGTATATTGAATGATTTCTGTACAAAGATTACTAC 7428 Query 79691 ACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 79750 ||||||| |||||||| | |||||| || || || ||||||||||| | | Sbjct 7427 TACTAATGGTACCTAAATTCTTTTGATTGGATTTGGCATTGCAAGCATCCTTATACAAGA 7368 Query 79751 TGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCT 79810 |||| || ||||||||||||| |||||||| ||||| || ||| | || |||| | Sbjct 7367 TGAATGGTGTACCAGTTTCAACTTGAGATTCCATAATGGCGAACCAAAGATCTTGAGCTT 7308 Query 79811 TTATTATA-GACTTG-TATCTCTTTTCTCT-TTCGTATTGT--GTATATAATCGTTCGAA 79865 | |||||| | |||| || || | | ||| |||| ||| | | | ||| Sbjct 7307 TAATTATACGTCTTGGTAGGCCTGGTGTGGCTTCATATTTCAAGTAGAGA---GCACGAT 7251 Query 79866 CTCGT-CTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACT 79924 | || | | || | | || || ||||| ||||| | | | ||| | Sbjct 7250 GTTGTTCAGAGTGAGTTTCAGCAAGACCTGGTGCTTCGTTTGGACAAAAGAGAGCCCAAT 7191 Query 79925 CTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGA 79983 | |||| | | || || | |||||||| |||| | |||||| || ||| || || Sbjct 7190 CACCATTTTGTTCGACACGCTCCATAAAGATATCACTGACCCAAAGGGC-ATAGAAAAGG 7132 Query 79984 TCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 80043 ||||| | ||| |||||| || || || || || || ||||| | ||| | | | | Sbjct 7131 TCTCTAGCTCTCATCTCCTCTTTACCAGTGTTTTTCTTGAGATCAATGAATTCAAAGACA 7072 Query 80044 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGA 80103 || | ||||| || |||||||| | ||| | | || || ||| || || ||| Sbjct 7071 TCGGCGTGCCATGGCTCCAAGTAAACGGCAAAGGCACCTTTTCTCTTGCCACCACCTTGA 7012 Query 80104 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA 80163 || | ||| | ||| || | ||| |||| | | |||||| | | ||||||| ||| Sbjct 7011 TCGACGTAACGAGCAGTATCATTGAAAACACGAAGCATTGGTACCAAACCATTGCTAGTA 6952 Query 80164 CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATT 80223 |||||||| || ||||| ||| | |||||||| ||| || | | ||| || Sbjct 6951 CCATTGGTACCACGAATATAACTTTGAGCAGCACGAATTTTATGAACGGCAATACCAATA 6892 Query 80224 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATG 80283 || || || | || ||||| | ||||||| |||| || ||||| ||||| || || || Sbjct 6891 CCACCAGCACTCTTTGAGATGAGTGCGCATTGTTTCAAGGTATCGTAGATACCATCGATT 6832 Query 80284 CTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATT--TGGTGACGACTAGTTCCCG 80341 ||| || |||| | || || ||||| ||||||| |||||| | || || | Sbjct 6831 GAATCCTCTTTCATTTGAACTAAGAAACAAGAAGACATTTGTGGTGATG--GTGTACCTG 6774 Query 80342 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCT 80401 |||| |||||||| || | || || || || |||| || || | | ||||| || | Sbjct 6773 CATTGAATAAGGTTGGTGTGGCATGAGTGAATAATTTCTCTGATAAACGTTTGTATGTGT 6714 Query 80402 CAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCT 80461 ||||| || || || || ||| || || | | |||||||| |||||||| | Sbjct 6713 TGATAGCAGAATCAATGTCTTCGCCATGGATACCAATTGAAACACGCATCAACATGTGTT 6654 Query 80462 GAGGTCTTTCAACGATCTTG 80481 | || | ||| ||||| ||| Sbjct 6653 GTGGACGTTCGACGATTTTG 6634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718252890346080