Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_005083.2 Length=244834 Score E Sequences producing significant alignments: (Bits) Value seq1 150 3e-31 >seq1 Length=107950 Score = 150 bits (166), Expect = 3e-31 Identities = 192/259 (74%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 147357 CACACTGGCGTAAT-TCCTTTCTGGAAACACTTTCAGACTGCGGTTAAATCGTGTTCTCA 147415 |||||||||||||| ||||||| ||||||||| ||||| || || ||||| || || || Sbjct 66359 CACACTGGCGTAATCCCCTTTCT-GAAACACTTCCAGACCGCTGTGAAATCATGCTCGCA 66301 Query 147416 AGGTGGTGTACGTGGCGGTGCTGCGAC-TCTGACTTACCCGATCTGGCACTTAGAAGTAG 147474 ||||| || || || || || ||||| || | ||||| || ||||| | ||||| | Sbjct 66300 GGGTGGCGTTCGAGGTGGCGCAGCGACGGCTTTC-TACCCTATTTGGCATCTGGAAGTTG 66242 Query 147475 AAAAGCTTCTTGTTCTGAAGAACAACAAAGGTGTTGAAGAGAACCGTATTCGTCATCTTG 147534 ||| || || || ||||||| ||| || | || ||||||||| |||||||||| | Sbjct 66241 AAAGTCTGCTGGTATTGAAGAATAACCGCGGCATCGAGGAGAACCGTGTTCGTCATCTGG 66182 Query 147535 ACTACAGCGTATCAATTAACCGATTGATGATGCAACGCCTGGTTAATAACGAGTACATCA 147594 |||| ||||| || ||||| ||||| | |||||||| |||||| | || | Sbjct 66181 ACTATGGCGTAATGATCAACCGCCTGATGTATCGCCGCCTGGTACGCAACGAGAATATTA 66122 Query 147595 CGCTATTCAGCCCCGATGA 147613 |||| |||||||| |||| Sbjct 66121 CGCTGTTCAGCCCGCATGA 66103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783323449001280