Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq1 125 2e-24 >seq1 Length=107950 Score = 125 bits (138), Expect = 2e-24 Identities = 230/337 (68%), Gaps = 0/337 (0%) Strand=Plus/Minus Query 38130 AAATCGAAAAAGAAATCGTTGAGAAAGGCAAAACGGCACCGCGAATCACCCCGCAGCACA 38189 ||||||||||||||||||| | || || |||||||| ||||| | ||||| | | | Sbjct 95475 AAATCGAAAAAGAAATCGTGGCCAAGGGAAAAACGGCCGCGCGAGTAACCCCAGAACGTA 95416 Query 38190 TCGAAGACGTGATTAAAAGCGAGCATTACTTTACTGCTTATGATGGACGAAATGGTGCCA 38249 || || ||| || ||| ||||| ||||| |||| |||||| || ||| ||| Sbjct 95415 TCCAAAGCGTTATCCGCGCCGAACATTATTTTACGGCTTTTGATGGCAGATCTGGCGCCC 95356 Query 38250 TTTCCAGCAACGAATATTGTGGCAGGGAAAAACCAGAGGAAGGCGATCGTGATTTATCAC 38309 | | || ||| |||| || |||| | ||||| |||| | Sbjct 95355 TGGCAAGTGGGACCTATGCCGGCAAAGAGGTGCCAGTTGCTGGCGACGCTGATCTTGAGT 95296 Query 38310 CATTGAAGTTGCTCACTTTCTGCGTACTGGTGCTGAAGAATGGCTTCACCGTCACCGGAG 38369 | | || || || || || || ||||||||| || |||| || |||| ||| ||||| | Sbjct 95295 CGCTTAAATTACTGACGTTTTGTGTACTGGTGTTGGAGAACGGATTCATCGTTACCGGTG 95236 Query 38370 AGAGTGCCTGTGCAAGCCCGGAAAACTTTGATGCAGAAATTGGCCGGAAGATTGCCCGGC 38429 | || |||||||||||||||||||||||| | || || || || |||||||| || | Sbjct 95235 AATCAGCTTGTGCAAGCCCGGAAAACTTTGATCCGGAGATCGGTCGTAAGATTGCGCGCC 95176 Query 38430 AAAATGCTGTAAACAAAATCTGGATGCTCGAAGGTTA 38466 | || || || ||||||||| || ||||| || Sbjct 95175 AGAACGCAGTCGCTAAAATCTGGCCACTTGAAGGATA 95139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124813373559320