Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq274 250 4e-61 >seq274 Length=24667 Score = 250 bits (276), Expect = 4e-61 Identities = 397/563 (71%), Gaps = 10/563 (2%) Strand=Plus/Plus Query 193634 AGTTGAACCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGA 193693 |||| | || |||| || || ||| | |||||||||||||| |||||||| || ||||| Sbjct 107 AGTTAATCCAACTGAAATTTACAATTTAGGTGCTCAAAGTCACGTTAAAGTATCATTTGA 166 Query 193694 GATGCCAGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGT 193753 ||| |||| ||||| | ||||||||| |||||| ||| | || | || ||| | Sbjct 167 TATGTCAGAATATACAGGTGATGTTGATGGTTTAGGTTGTCTCCGTTTATTGGATGCAAT 226 Query 193754 TCGTATGTTG-GGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGT 193812 ||||| |||| || | ||||| | ||| | ||| || || || ||| ||| | | Sbjct 227 TCGTA-GTTGTGGTTTAGAGAAGAAGGTTAGATACTACCAAGCTTCAACCTCTGAATTAT 285 Query 193813 ATGGTGGTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTT 193872 ||||| |||| || | ||||| |||||| ||||||||||| ||||||| || || | Sbjct 286 ATGGTAAGGTTCAAGAGATTCCACAATCAGAGACCACACCATTCTATCCACGTTCACCAT 345 Query 193873 ATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGAT 193932 | | ||||||||| |||| ||||||||| | || ||||||||| |||| | Sbjct 346 ACGCTGTAGCAAAACAATATGCCTATTGGATCGTTGTAAACTATCGTGAGGCATACGATA 405 Query 193933 TCCACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTG 193992 | |||| || |||||| | ||||| || ||||| ||| | |||||| || |||| Sbjct 406 TGTACGCATGTAATGGTATCTTATTCAACCATGAATCACCACGTAGAGGTCCAACCTTTG 465 Query 193993 TAACTCGTAAGATTACACAAGGTT--TATCTAAGATCTCTGTTGGATTACAGA--AGATT 194048 ||||| | ||||| ||| | || | || || | ||| || ||| | || Sbjct 466 TAACTAGAAAGAT--CACTCGTTTCGTTGCTGGTATTGCATGTGG--TAAAGATGAAATC 521 Query 194049 CTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAA 194108 || || | |||||| |||| ||||| | |||||||| ||||| | || || || ||| Sbjct 522 CTCTACTTGGGTAATATTAACGCTAAACGTGATTGGGGTCACGCCAGAGACTACGTCGAA 581 Query 194109 GCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168 || |||||||||||||| ||||| || |||| || |||| || || || || |||||| Sbjct 582 GCAATGTGGTTAATGTTACAACAAGAGAAACCAGAAGATTTCGTTATCGCCACTGGTGAA 641 Query 194169 CAGTATTCTGTTAGAGACTTTGT 194191 |||| ||| | || ||||| Sbjct 642 ACTCATTCAGTTCGTGAATTTGT 664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807537312652320