Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq319 316 5e-81 seq326 122 2e-22 >seq319 Length=25483 Score = 316 bits (350), Expect = 5e-81 Identities = 643/945 (68%), Gaps = 11/945 (1%) Strand=Plus/Plus Query 363373 GATCTCGAGTATGATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATC 363432 ||| |||| |||||| | || |||| || || |||| ||||| || |||||| Sbjct 6569 GATTTCGATTATGATTTCTTTGGATTCAAAACATTGGAACGTTCCTATCTTCATCGTATT 6628 Query 363433 AATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCAT 363492 ||| | || || ||||| || || || ||||| ||||||||| | |||||||||||| Sbjct 6629 GGTGGCAAAATCGTCGAACGTCCACAACACATGTTGATGCGTGTTTCAATTGGTATCCAT 6688 Query 363493 TGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACG 363552 || || ||||| | || || | ||||| || | | || | ||||||| Sbjct 6689 GGCGAAGACATTGATTCTGCTATCAACACATACAAACGTTTATCAGAGAAATTATTCACT 6748 Query 363553 CACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTT 363612 || ||||| ||||| | | |||||| || || | ||||| ||||||||||| ||| Sbjct 6749 CATGCCACACCAACCTTATTCAATGCAGGTACACCATCACCACAAATGTCTTCTTG-TTT 6807 Query 363613 CTTC-TAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGC 363671 ||| | ||||||| || ||||| ||||| ||||||| || || | || | || || Sbjct 6808 CTTAGTTCAAATGAAAGAGGATTCAATCGATGGTATCTACGATACCTTGAAACAATGCGC 6867 Query 363672 TCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAA 363731 || || || |||| ||| || || |||||| | | | || || ||||||| | Sbjct 6868 ACTCATCTCAAAGAGTGCTGGTGGTATTGGTATTGCCGTTCATAAAATTCGTGCTGCTCA 6927 Query 363732 CAGTTACATTCGCGGCACAGGGGGATACTCG-AATGGGCTGGTTCCCATGCTTCGTGTGT 363790 ||||| ||||| || || || |||| | ||||| |||| || ||||||||||| | Sbjct 6928 AAGTTATATTCGTGGTACCAATGG-TACTAGCAATGGTTTGGTACCAATGCTTCGTGTTT 6986 Query 363791 TTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTA 363850 | | ||||||| | |||||||| || ||||| || ||| | ||||| || ||||| Sbjct 6987 TCAATGATACTGCTCGTTACGTCGATCAAGGTGGTGGCAAGAGAAAAGGTGCCTTTGCCG 7046 Query 363851 TGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGG 363910 | || | ||||| || |||||| | ||||| || |||| ||| ||||||||| | Sbjct 7047 TTTACTTGGAGCCATGGCACGCCGATGTCTTTGAATTCATTGATCTCAAGAAAAACACTG 7106 Query 363911 GAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTA 363970 | |||||||| || | || | || || |||||||| |||||||| ||| |||| Sbjct 7107 GTAAAGAGGAGATGAGAGCTAGAGACCTTTTCTATGCCCTTTGGGTCAGTGATATCTTTA 7166 Query 363971 TGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTC 364030 || |||| || || | | ||||| | |||||||| ||| ||||| ||||||| Sbjct 7167 TGGAGCGTGTCGAACAAAATGGTGATTGGGCTCTCTTTTGTCCAAACGAAGCACCAGGTC 7226 Query 364031 TTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAA 364090 || | || ||| | || |||||| ||| || |||||| | | | Sbjct 7227 TTGCTGAAACTCACTCTGAACAACATCGTGCTCTCTACTTGAAATATGAAGC-CACACCA 7285 Query 364091 AGGCTCGTAAGAC----AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAG 364146 | || ||||| |||| || || | || ||||| ||||| ||||| || || Sbjct 7286 GGCCTACCAAGACGTATAATTAAAGCTCAAGATCTTTGGTTCGCCATTATGGAATCTCAA 7345 Query 364147 ATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAG 364206 |||| || || ||||| | || ||||| || ||| | ||||| ||| ||||| || Sbjct 7346 GTTGAAACTGGTACACCATTCATCTTGTATAAGGATGCTTGCAATGCCAAATCCAATCAA 7405 Query 364207 CAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGC 364265 || | | ||||| ||| || || || || || ||||| || || ||| |||| || | Sbjct 7406 AAGAATTTAGGTACCATT-AGTAGTAGTAATCTTTGTACAGAAATCATTCAATATACATC 7464 Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCC 364310 || || || | |||||| ||||| || || || ||||| ||||| Sbjct 7465 ACCAGATGAAATTGCCGTTTGTAATCTCGCCTCTATCGCACTTCC 7509 Score = 109 bits (120), Expect = 1e-18 Identities = 288/433 (67%), Gaps = 14/433 (3%) Strand=Plus/Plus Query 364732 CGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAAC 364791 || ||||| ||| | | || || ||||| || ||||| || || ||||| || ||| Sbjct 7961 CGTAACTCACTCTTAATTGCACCAATGCCAACCGCTTCAACAAGTCAAATCCTTGGTAAC 8020 Query 364792 AACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAA 364851 || || || || ||||| | || ||| |||| || || ||| | | || ||| Sbjct 8021 AATGAATGTTTTGAACCATACACTTCAAATATTTACAGTCGTCGTGTTTTAGCTGGTGAA 8080 Query 364852 TTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGAC 364911 || | | || ||||| | || | ||||||| || | || | | || || Sbjct 8081 TTCACAATTGTCAATAAACAATTACTAGAGGATCTCATGGA--GTTGGGTATTTGGACAC 8138 Query 364912 -AGC-ATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTC 364969 || ||||||||| | ||||| || || |||||| | || |||| || | | Sbjct 8139 CAGAGATGAAGAACCAAATCATTGCAGCACGTGGTTCCATTCAATCCATTGGTGGCATCC 8198 Query 364970 CAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATT--TCCATGCGAACTCTCAT 365027 | || || |||| | || ||||| || ||||||||| || | | ||||||||| Sbjct 8199 CTGATGAATTGAAAGAACTCTATAAAACTGTTTGGGAAATTCGTCAAAG--AACTCTCAT 8256 Query 365028 TGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCAT 365087 ||||||||| || ||||| |||||||| ||| ||| ||||| || || || ||||| Sbjct 8257 TGATATGGCCGCTGATCGTGGTGCTTTCATCGATCAAAGCCAAAGTTTCAATGTTTTCAT 8316 Query 365088 GACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTAC---GGGTGGAAATCCGG 365144 | | ||||||| ||||| || || || |||||||||||| || ||||| || Sbjct 8317 TGCAGAACCAACCTTTGCCAAACTCACCTCTATGCATTTCTACTCATGGAGGAAA---GG 8373 Query 365145 TCTTAAGACAGGT 365157 | | ||||| ||| Sbjct 8374 TTTAAAGACTGGT 8386 >seq326 Length=24039 Score = 122 bits (134), Expect = 2e-22 Identities = 331/496 (67%), Gaps = 22/496 (4%) Strand=Plus/Plus Query 145295 TTTATCGGTTCGCACTTTGATAAAACGAGGAAAACGAAGAGCAATACCCTTATTTGGGTC 145354 |||||| | || | | | || |||||||| ||||| | ||| ||||| |||||||| || Sbjct 6905 TTTATCAGGACGAATTCTAATGAAACGAGGGAAACGTAAAGCGATACCTTTATTTGGATC 6964 Query 145355 AACGATTCCATGTCCTGCCATGTGAACCGGAGAAATTGACAAATCTGCCGACAATACTTC 145414 | || ||| | | || | ||||| ||||| ||||||||||| || | ||| ||||| Sbjct 6965 CAAAATACCAGATGCAGCAGTATGAACAGGAGAGATTGACAAATCAGCAGCCAACACTTC 7024 Query 145415 CCATACTTGAGTTGGACTAAACCAAACATCTGGTTTAAGCGATGGTACATCTGCGACATA 145474 ||| || | |||| ||||||||||| ||||||| || ||| | || | Sbjct 7025 CCAAACACAACTTGGTGAGAACCAAACATCAGGTTTAATTGA------ATCAGAGATACG 7078 Query 145475 GTAATCA-GACG-GTTTCTGTGGTACAATATGTGGCGT-AAGACTGTCG-GACAATTGAA 145530 | | | | ||| | || || | | ||| || | || | | | || ||| Sbjct 7079 GAATTGATTACGAGGTTGATTG--ATTAGATGAGGTTTCAATTCATTGGTGAAGGTTG-- 7134 Query 145531 TTAAATCTTCATCTGAAAATCCAGTTCCGATCTTGCATACACTTTGGAACACTTCTTCGT 145590 | || | |||||| || || ||||| || || || || | ||||||| |||| | || Sbjct 7135 TCAATTGTTCATCAGAGAAACCAGTACCAATTTTACAGAGTGTTTGGAATTCTTCATTGT 7194 Query 145591 CTGGATCAT-ACACCGCAAGAAGGTATGCACCATATACACCAGTACGTTTTCCGCGACCG 145649 | ||||| ||| ||| || || |||||||| ||| || | ||| || ||| Sbjct 7195 TTTCATCATAACAAGCCAATAA-ATAAGCACCATAGGTACCTGTTCTTTTACCCTTACC- 7252 Query 145650 GTATACC---CCGCAATTGGTACAAGATCACAACTATCACCCATTCCGGCAAGATAATCC 145706 ||||| | |||| || || | ||| ||||||| ||| || | |||||| Sbjct 7253 --ATACCATGCACCAATGGGCACCAAATCTAAACTATCGGTCATACCTTGCATATAATCT 7310 Query 145707 TTTTTAAGTTTTAGCCAATTGAGAGAACGTTTCGATGGTTCATAGCTAGAGTTATCGTCC 145766 ||||||| |||| |||||| |||||| |||||||||||| | || || || | | Sbjct 7311 TTTTTAATCTTTAACCAATTATAAGAACGACGAGATGGTTCATAGATTGATTTCTCTTTC 7370 Query 145767 AATGATTTTACCATTA 145782 || | ||||||||||| Sbjct 7371 AAAGTTTTTACCATTA 7386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303324008985704