Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq90 123 2e-23 seq1199 113 4e-20 seq641 107 2e-18 seq102 107 2e-18 >seq90 Length=44396 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || ||||| |||||||| ||| | || || ||||||| || | Sbjct 14202 CAAGATGCAAATCTTCGTTAAAACCTTAACTGGTAAAACCATCACTCTCGAAGTTGAAGG 14261 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 |||| |||||| | |||||| |||||| ||||||||||| || || || || Sbjct 14262 TTCAGACAACATCGAAAACGTCAAAGCCAAGATTCAAGACAAAGAAGGTATCCCACCAGA 14321 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 |||||| | || || | | ||| || ||| | ||||||| | | | |||||| Sbjct 14322 TCAACAACGTCTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTTTATCCGATTA 14381 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||| ||||| ||||| || | || ||||| |||||||| ||||| || Sbjct 14382 TAACATCCAAAAGGAATCAACCCTCCACTTAGTTTTAAGATTAAGAGGTGG 14432 >seq1199 Length=11192 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||||||||| | ||||| ||| | || || | |||||||| | Sbjct 949 ATGCAAATCTTTGTAAAAACTCTCACTGGTAAAACCATCACATTAGAAGTCGAAGGTTCA 890 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | ||| || | |||||| || || || |||||||| || || || |||||| Sbjct 889 GATAACATTGAAAATGTCAAAGCCAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAA 830 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || ||| | |||| | || || ||| | ||||||| | | | | | | ||||| || Sbjct 829 CAAAGATTAATTTTTGCAGGTAAACAATTAGAAGATGGTCGTA-CTTTATCAGATTACAA 771 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || ||||||||||| ||| | |||||||| |||||||| ||||||||| Sbjct 770 TATCCAAAAAGAATCCACACTCCATTTAGTTTTAAGATTAAGAGGAGGA 722 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||||| |||||| | ||||| |||||||||||||| ||| | || || | ||||| || Sbjct 1412 AAACATTATGCAAATTTTTGTTAAAACATTAACTGGTAAAACCATCACATTGGAAGTTGA 1353 Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103 | || | ||| || | || ||| || ||| || |||||||| || || || Sbjct 1352 AGGTTCAGATAACATTGAAAATGTTAAAGCCAAAATTCAAGATAAAGAAGGTATCCCACC 1293 Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-G 24162 || ||||| | || |||| || || || ||| | ||||||| | || | | | | Sbjct 1292 AGACCAACAACGTCTCATTTTCGCTGGTAAACAATTAGAAGATGGTCG-TACTTTATCAG 1234 Query 24163 ATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||| || || ||||||||||| ||| | |||||||| |||||||| ||||| || Sbjct 1233 ATTACAATATCCAAAAAGAATCCACACTCCATTTAGTTTTAAGATTAAGAGGTGG 1179 >seq641 Length=13309 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | ||||| ||| | ||||| ||||||| || | | Sbjct 13198 ATGCAAATTTTTGTTAAAACCCTCACTGGTAAAACCATTACACTCGAAGTTGAAGGTAGT 13139 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||| |||||| | || || || || || |||||||| || ||||| |||||| Sbjct 13138 GACAACATCGAAAATGTAAAGGCTAAAATCCAAGATAAAGAAGGTATTCCTCCAGATCAA 13079 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || |||| || || || ||| | ||||||| | | | || |||||||| Sbjct 13078 CAACGTCTCATTTTCGCAGGTAAACAATTGGAAGATGGCCGTACTCTCTCTGATTATAAT 13019 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||| || | ||||| || | ||||| ||||| || Sbjct 13018 ATCCAAAAAGAATCAACTCTCCATTTGGTACTCAGATTAAGAGGTGG 12972 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| |||||||||||||| || | || || | ||||| || | Sbjct 12970 ATGCAAATCTTTGTTAAAACATTAACTGGTAAGACTATCACTCTTGAAGTTGAAAGCTCA 12911 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | || || | || ||| ||||||| || |||||||| || || || |||||| Sbjct 12910 GATAATATTGAAAATGTTAAAACAAAGATTCAAGATAAAGAAGGTATTCCACCAGATCAA 12851 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||||| || || || ||| | ||||||| | | | ||||| ||| Sbjct 12850 CAAAGATTGATTTTCGCAGGTAAACAATTGGAAGATGGTCGTACTCTTTCTGATTACAAC 12791 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| ||||| || |||| || || | ||||| ||||| || Sbjct 12790 ATTCAAAAGGAATCCACTCTTCACTTGGTCCTCAGATTAAGAGGTGG 12744 >seq102 Length=41085 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | ||||| || | || ||| | || ||||| | | Sbjct 161 ATGCAAATCTTTGTTAAAACTCTCACTGGCAAGACTATCACCTTAGAGGTCGAAGGTAGT 220 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | ||| || | || ||| |||||| ||||||||||| || || || |||||| Sbjct 221 GATAACATTGAAAATGTTAAAGCCAAGATTCAAGACAAAGAAGGTATTCCACCAGATCAA 280 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| | |||| || || || ||| | ||||||| | | | ||||| || Sbjct 281 CAAAGATTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAT 340 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||| || |||| ||||| |||||||| ||||| || Sbjct 341 ATCCAAAAAGAATCCACTCTTCACTTAGTTTTAAGATTAAGAGGTGG 387 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | |||||||| | || ||| | || ||||| | | Sbjct 617 ATGCAAATCTTTGTTAAAACCCTCACTGGAAAGACCATCACCTTAGAGGTCGAAGGTAGT 676 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | ||| || | || ||| |||||| ||||||||||| || || || |||||| Sbjct 677 GATAACATTGAAAATGTTAAAGCCAAGATTCAAGACAAAGAAGGTATTCCACCAGATCAA 736 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || |||| || || || ||| | ||||||| | | || ||||| ||| Sbjct 737 CAACGTCTCATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGATTACAAC 796 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||| || |||| || || | ||||||||||| || Sbjct 797 ATCCAAAAAGAATCCACTCTTCACTTGGTTCTCAGATTGAGAGGTGG 843 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | ||||| ||| | || ||| | ||||| || | Sbjct 389 ATGCAAATCTTTGTTAAAACTCTCACTGGTAAAACCATCACCTTGGAAGTTGAAGGTTCT 448 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | || || | ||||| |||||| ||||||||||| || || || |||||| Sbjct 449 GATAATATTGAAAATGTCAAGGCCAAGATTCAAGACAAAGAAGGTATTCCACCAGATCAA 508 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| | |||| || || || ||| | ||||||| | | | || ||||| ||| Sbjct 509 CAAAGATTAATTTTCGCTGGTAAACAATTAGAAGATGGCCGTACTCTCTCTGATTACAAC 568 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||||||||| || |||| || || | ||||| ||||| || Sbjct 569 ATCCAAAAAGAATCCACTCTTCACTTGGTCCTCAGATTAAGAGGTGG 615 Score = 82.4 bits (90), Expect = 7e-11 Identities = 100/135 (74%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGC-GGCAAGCAACTCGA 24142 || |||||||| || || || |||||||| ||| | |||| || || |||||| | || Sbjct 25 GATAAAGAAGGTATTCCACCAGATCAACAAAGATTAATTTTTCGCTGGTAAGCAATTAGA 84 Query 24143 AGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||||| | | | || ||||| ||||| ||||||||||| || | |||||||| | Sbjct 85 AGATGGCCGTACTCTCTCTGATTACAACATCCAAAAAGAATCCACTCTCCATTTAGTTCT 144 Query 24203 AAGATTGAGAGGAGG 24217 ||||| ||||| || Sbjct 145 CAGATTAAGAGGTGG 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429926714994660