Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_008515.1 Length=165890 Score E Sequences producing significant alignments: (Bits) Value seq1 163 3e-35 >seq1 Length=107950 Score = 163 bits (180), Expect = 3e-35 Identities = 195/263 (74%), Gaps = 10/263 (4%) Strand=Plus/Plus Query 138730 TCATGCGGACTGAACAAAGTAATATAATCGTTCTTTCCGAATCGTTCCATCATCAAATCA 138789 |||||||| ||||||| ||||||| ||||| | | | || | || | |||| Sbjct 66103 TCATGCGGGCTGAACAGCGTAATATTCTCGTTGCGTACCAGGCGG-CGAT----ACATCA 66157 Query 138790 TTCAGTTGAACA-----CCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGT 138844 | ||||| || ||||| |||| |||||||| ||||| || || | ||| || Sbjct 66158 GGCGGTTGATCATTACGCCATAGTCCAGATGACGAACACGGTTCTCCTCGATGCCGCGGT 66217 Query 138845 TATTTTTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAG 138904 |||| ||||| || || ||| |||||||||||| |||||||||||| || |||| || | Sbjct 66218 TATTCTTCAATACCAGCAGACTTTCAACTTCCAGATGCCAAATAGGGTAGAAAGCCGTCG 66277 Query 138905 CAGCGCCGCCACGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCC 138964 | ||||| || |||| |||||||| ||||||||||| ||||| ||||| || |||||| Sbjct 66278 CTGCGCCACCTCGAACGCCACCCTGCGAGCATGATTTCACAGCGGTCTGGAAGTGTTTCA 66337 Query 138965 AAAAAGGAATAACACCAGTATGG 138987 ||| || || || ||||| ||| Sbjct 66338 GAAAGGGGATTACGCCAGTGTGG 66360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530708244552000