Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1457 100 6e-16 seq70 100 6e-16 seq1299 98.7 2e-15 seq641 98.7 2e-15 seq211 98.7 2e-15 seq206 98.7 2e-15 seq127 98.7 2e-15 seq77 98.7 2e-15 >seq1457 Length=3165 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 2963 AGCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAG 2904 Query 142563 CCCCACATCGGGC 142575 |||| | | |||| Sbjct 2903 CCCCCCGTTGGGC 2891 >seq70 Length=51268 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||||| ||||||||||||| ||||||| ||||||||| Sbjct 27620 AGCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAG 27561 Query 142563 CCCCACATCGGGC 142575 |||| | | |||| Sbjct 27560 CCCCCCGTTGGGC 27548 >seq1299 Length=5507 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||| Sbjct 3369 GCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAGC 3310 Query 142564 CCCACATCGGGC 142575 ||| | | |||| Sbjct 3309 CCCCCGTTGGGC 3298 >seq641 Length=13309 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||| Sbjct 3952 GCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAGC 3893 Query 142564 CCCACATCGGGC 142575 ||| | | |||| Sbjct 3892 CCCCCGTTGGGC 3881 >seq211 Length=34795 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||| Sbjct 19933 GCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAGC 19874 Query 142564 CCCACATCGGGC 142575 ||| | | |||| Sbjct 19873 CCCCCGTTGGGC 19862 >seq206 Length=29238 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||| Sbjct 4118 GCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAGC 4059 Query 142564 CCCACATCGGGC 142575 ||| | | |||| Sbjct 4058 CCCCCGTTGGGC 4047 >seq127 Length=49074 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||| Sbjct 27894 GCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAGC 27835 Query 142564 CCCACATCGGGC 142575 ||| | | |||| Sbjct 27834 CCCCCGTTGGGC 27823 >seq77 Length=45742 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||||| Sbjct 37270 GCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAGC 37211 Query 142564 CCCACATCGGGC 142575 ||| | | |||| Sbjct 37210 CCCCCGTTGGGC 37199 Score = 89.7 bits (98), Expect = 1e-12 Identities = 59/64 (92%), Gaps = 1/64 (2%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTC-GTGGGTTCGAG 142562 |||||| |||||||||||||||||||| ||||||||||||| |||||| | ||||||||| Sbjct 37703 GCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGGTTCGAG 37644 Query 142563 CCCC 142566 |||| Sbjct 37643 CCCC 37640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027813464250252