Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1199 143 2e-29 seq102 136 3e-27 seq90 120 3e-22 seq641 113 4e-20 >seq1199 Length=11192 Score = 143 bits (158), Expect = 2e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || ||| ||||||||||| | || ||||||||||| || |||||||| Sbjct 1176 ATACCACCTCTTAATCTTAAAACTAAATGGAGTGTGGATTCTTTTTGGATATTGTAATCT 1235 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| |||||| | ||||||||||||| | |||||||| |||||||| || Sbjct 1236 GATAAAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATGAGACGTTGTTGGTCTGGT 1295 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 || || |||||||| || ||| ||| | |||| | | ||||| | | || | ||| Sbjct 1296 GGGATACCTTCTTTATCTTGAAT-TTTGGCTTTAACATTTTCAATGTTATCTGAACCTTC 1354 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || || | ||||| |||||||| ||||| Sbjct 1355 AACTTCCAATGTGATGGTTTTACCAGTTAATGTTTTAACAAAAATTTGCAT 1405 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || | || ||| | || || || | || ||||||||||| ||||||||||| Sbjct 948 ATGCCACCTCTTAATCTGAGGACCAAGTGAAGAGTGGATTCTTTTTGGATGTTGTAATCA 1007 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| |||||| | ||||||||||||| | |||||||| |||||||| || Sbjct 1008 GAAAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATGAGACGTTGTTGGTCTGGT 1067 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 ||||| |||||||| || ||| ||| | |||| | | ||||| | | || | ||| Sbjct 1068 GGAATACCTTCTTTATCTTGAAT-TTTGGCTTTAACATTTTCAATGTTATCTGAACCTTC 1126 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| || | || | ||||| || || |||||||| ||||| || ||||| Sbjct 1127 GACTTCTAATGTGATGGTTTTACCAGTGAGAGTTTTAACAAAGATTTGCAT 1177 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || | || ||| ||||||||||| | || ||||||||||| || |||||||| Sbjct 723 CCTCCTCTTAATCTTAAAACTAAATGGAGTGTGGATTCTTTTTGGATATTGTAATCTGAT 782 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||||||| |||||| | ||||||||| || | || | | ||||| || || || Sbjct 783 AAAGTACGACCATCTTCTAATTGTTTACCTGCAAAAATTAATCTTTGTTGATCTGGTGGG 842 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || |||||||| || || || ||| | | ||||| | | || | |||||| Sbjct 843 ATACCTTCTTTATCTTGGATTTTGGCTTTGACATTTTCAATGTTATCTGAACCTTCGACT 902 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | || | ||||| || || |||||||||||||| || |||||| Sbjct 903 TCTAATGTGATGGTTTTACCAGTGAGAGTTTTTACAAAGATTTGCATG 950 >seq102 Length=41085 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || ||| |||||||| || | || ||||||||||| || |||||||| Sbjct 390 ATACCACCTCTTAATCTTAAAACTAAGTGAAGAGTGGATTCTTTTTGGATATTGTAATCA 331 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| |||||| | ||||||||||||| | || | | ||||| || || Sbjct 330 GAAAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGT 271 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| |||||| ||| | | ||||| | | || | |||| Sbjct 270 GGAATACCTTCTTTGTCTTGAATCTTGGCTTTAACATTTTCAATGTTATCACTACCTTCG 211 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || |||||||| ||||| || ||||| Sbjct 210 ACCTCTAAGGTGATAGTCTTGCCAGTGAGAGTTTTAACAAAGATTTGCAT 161 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| || | | ||| | ||| || || | || ||||||||||| ||||||||||| Sbjct 845 TACCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGATTCTTTTTGGATGTTGTAATCAG 786 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 | ||||||| |||||| | ||||||||||||| | |||||||| ||||| || || | Sbjct 785 AGAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATGAGACGTTGTTGATCTGGTG 726 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 |||| ||||||||||| |||||| ||| | | ||||| | | || | ||||| Sbjct 725 GAATACCTTCTTTGTCTTGAATCTTGGCTTTAACATTTTCAATGTTATCACTACCTTCGA 666 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || | ||| | || || || || || ||||| ||||| || ||||| Sbjct 665 CCTCTAAGGTGATGGTCTTTCCAGTGAGGGTTTTAACAAAGATTTGCAT 617 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || ||| | || || || | || ||||||||||| ||||||||||| Sbjct 618 ATACCACCTCTTAATCTGAGGACCAAGTGAAGAGTGGATTCTTTTTGGATGTTGTAATCA 559 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| |||||| | ||||||||||||| | || | | ||||| || || Sbjct 558 GAGAGAGTACGGCCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGT 499 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| |||||| || | | ||||| | || | ||| Sbjct 498 GGAATACCTTCTTTGTCTTGAATCTTGGCCTTGACATTTTCAATATTATCAGAACCTTCA 439 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||||| || || |||||||| ||||| || ||||| Sbjct 438 ACTTCCAAGGTGATGGTTTTACCAGTGAGAGTTTTAACAAAGATTTGCAT 389 Score = 87.8 bits (96), Expect = 2e-12 Identities = 103/138 (75%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || ||| | ||||||||| | || ||||||||||| ||||||||||| Sbjct 162 ATACCACCTCTTAATCTGAGAACTAAATGGAGAGTGGATTCTTTTTGGATGTTGTAATCA 103 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCG-TAGATGAGACGCTGTTGGTCCGG 114271 | |||||| |||||| | ||| ||||||||| | || | | ||||| || || Sbjct 102 GAGAGAGTACGGCCATCTTCTAATTGCTTACCAGCGAAAAATTAATCTTTGTTGATCTGG 43 Query 114272 AGGAATGCCTTCTTTGTC 114289 ||||| |||||||| || Sbjct 42 TGGAATACCTTCTTTATC 25 >seq90 Length=44396 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114152 AATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC 114211 |||||| || | || ||| |||||||| || | || ||||| ||||| ||||| ||||| Sbjct 14436 AATACCACCTCTTAATCTTAAAACTAAGTGGAGGGTTGATTCCTTTTGGATGTTATAATC 14377 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 | | ||||||| |||||| | ||||||||| || |||| ||||| ||||| || || Sbjct 14376 GGATAAAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCTGG 14317 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 || || ||||||||||| |||||| ||| | | ||| | | |||| | ||| Sbjct 14316 TGGGATACCTTCTTTGTCTTGAATCTTGGCTTTGACGTTTTCGATGTTGTCTGAACCTTC 14257 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||| || || | ||||| || || || ||||| Sbjct 14256 AACTTCGAGAGTGATGGTTTTACCAGTTAAGGTTTTAACGAAGATTTGCAT 14206 >seq641 Length=13309 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || ||| | || ||||| | || ||||||||||| || || ||||| Sbjct 12969 ATACCACCTCTTAATCTGAGTACCAAATGGAGAGTTGATTCTTTTTGGATATTATAATCA 13028 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| |||||| | ||||||||| ||| | |||||||| ||||| || ||| Sbjct 13029 GAGAGAGTACGGCCATCTTCCAATTGTTTACCTGCGAAAATGAGACGTTGTTGATCTGGA 13088 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| |||||||| || || || |||| | ||| | | |||| | ||| Sbjct 13089 GGAATACCTTCTTTATCTTGGATTTTAGCCTTTACATTTTCGATGTTGTCACTACCTTCA 13148 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||| || || || ||||| |||||||| ||||| Sbjct 13149 ACTTCGAGTGTAATGGTTTTACCAGTGAGGGTTTTAACAAAAATTTGCAT 13198 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || ||| | || || || | || ||||| ||||||||||||||||| Sbjct 12741 ATACCACCTCTTAATCTGAGGACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCA 12800 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| |||||| | ||||||||| ||| | || | | ||||| || || Sbjct 12801 GAAAGAGTACGACCATCTTCCAATTGTTTACCTGCGAAAATCAATCTTTGTTGATCTGGT 12860 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 ||||| |||||||| || |||| ||||||||| | | ||||| | || | | ||| Sbjct 12861 GGAATACCTTCTTTATCTTGAATC-TTTGTTTTAACATTTTCAATATTATCTGAGCTTTC 12919 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || | ||||| ||||| || ||||| Sbjct 12920 AACTTCAAGAGTGATAGTCTTACCAGTTAATGTTTTAACAAAGATTTGCAT 12970 Score = 102 bits (112), Expect = 7e-17 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 114194 TTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGAT 114253 |||||||||||||||||| | ||||||| |||||| | ||||||||| ||| | || Sbjct 12554 TTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCCAATTGTTTACCTGCGAAAAT 12613 Query 114254 GAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTC 114313 |||||| ||||| || || ||||| |||||||| || ||||| ||| | | || Sbjct 12614 GAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATCTTGGCTTTAACATTCTC 12673 Query 114314 AACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373 || | | || | ||| || || | || | ||||| || || || ||||| ||||| Sbjct 12674 AATGTTATCACTACCTTCAACTTCGAGTGTAATGGTTTTACCAGTGAGGGTTTTAACAAA 12733 Query 114374 AATCTGCAT 114382 || ||||| Sbjct 12734 GATTTGCAT 12742 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || ||| | |||||||| | || ||||||||||||||||||||||| Sbjct 13197 ATACCACCTCTTAATCTGAGTACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAATCA 13256 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTG 114265 | ||||||| |||||| | ||||||||| ||| | |||||||| ||||| Sbjct 13257 GAAAGAGTACGACCATCTTCCAATTGTTTACCTGCGAAAATGAGACGTTGTTG 13309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420125326672464