Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_010106.1 Length=52975 Score E Sequences producing significant alignments: (Bits) Value seq1 147 7e-31 >seq1 Length=107950 Score = 147 bits (162), Expect = 7e-31 Identities = 270/394 (69%), Gaps = 5/394 (1%) Strand=Plus/Minus Query 51901 AGAGCCAATGTTCTTTGGTCAGAACGTTAACGTTGCTCGATATGACCAACAGAAGTACGG 51960 |||||| |||||| | || ||| || |||||||| || || || || ||||||||| | Sbjct 64706 AGAGCCTATGTTCCTCGGGCAGTCTGTCAACGTTGCGCGCTACGATCAGCAGAAGTACCG 64647 Query 51961 CATATTCGAGAAGTTAATTGAGAAACAATTGTCATTCTTCTGGCGACCGGAAGAGGTAGA 52020 | ||||| ||| | || || ||||| | || ||||||||||| |||||||| || || Sbjct 64646 CGATTTCGAAAAGCTGATCGAAAAACAGCTCTCCTTCTTCTGGCGCCCGGAAGAAGTCGA 64587 Query 52021 CGTTTCCCAGGACCGTATTGATTATCAGAAGCTACCTGCAA----ACGAACAACACATTT 52076 | | || || || || |||| ||| | | |||||| | || | ||||||| Sbjct 64586 CATAACCACCGATCGCATCGATT-TCAATACTAAGCTGCAAGAGCATGAGCGGCACATTT 64528 Query 52077 TCACCAGTAATCTTCGTTATCAGATTCTTCTTGACTCAATTCAGGGACGTGGGCCCAACA 52136 || || || || ||||| |||| ||| || || || |||||||||| | || ||| Sbjct 64527 TCCTGAGCAACCTCCGTTACCAGACTCTGCTGGATTCCGTTCAGGGACGCAGCCCAAACG 64468 Query 52137 CAGTTTTGCTTCCAATCGTGAGCATTCCTGAATTGGAGACGTGGATTGAAACCTGGTCTT 52196 || |||| || | | ||||| || | || |||||| | ||||| ||||| | Sbjct 64467 CAACGCTGCTGCCGCTTATTTCAATTCCAGAGCTCGAAACGTGGGTGGAAACATGGTCGT 64408 Query 52197 TCTCCGAGACTATTCATTCACGTTCTTATACCCACATCATTCGTAATATTGTTACAGACC 52256 |||| || || ||||| || || |||||||| ||||| ||| || || | Sbjct 64407 TCTCTGAAACCATTCACAGCCGCAGCTACACCCACATTATTCGCGGTATGGTGGATGATC 64348 Query 52257 CAAGCATTATCTTTGATGAAATCGTAACTAACGA 52290 | |||||| |||| |||| || || || |||| Sbjct 64347 CGAGCATTGTCTTCGATGGCATTGTGACCGACGA 64314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169394835434168