Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq319 163 3e-35 >seq319 Length=25483 Score = 163 bits (180), Expect = 3e-35 Identities = 1124/1773 (63%), Gaps = 74/1773 (4%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 ||||| |||||||| || ||||| | || | | |||| | || | |||||| |||| Sbjct 8400 CGGAGATAGTACATACCAGTCTTTAAACCTTTCCTCCATGAGTAGAAATGCATAGAGGTG 8341 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | ||||| | | ||||| | || | ||||||| |||||||||||| Sbjct 8340 AGTTTGGCAAAGGTTGGTTCTGCAATGAAAACATTGAAACTTTGGCTTTGATCGATGAAA 8281 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTTCT 113775 |||||||| || ||||||||||| | | | ||| | |||||||| |||||| | Sbjct 8280 GCACCACGATCAGCGGCCATATCAATGAGAGTTCTTTGAC-GAATTTCCCAAACAGTTTT 8222 Query 113776 GTAGAGGTTCTT--AATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833 |||| |||||| ||| ||||| ||||| | | || ||| ||||| |||| || Sbjct 8221 ATAGA-GTTCTTTCAAT-TCATCAGGGATGCCACCAATGGATTGAATGGAACCACGTGC- 8165 Query 113834 TTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 113890 || | |||| | | |||||| || || ||| | ||| | || |||||||||| Sbjct 8164 -TG-CAATGATTTGGTTCTTCATCTCTGGTGTCCAAATACCCAACTCCATGAGATCCTCT 8107 Query 113891 ACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 113950 | | || |||||||||| || ||||| || | || | || ||||| Sbjct 8106 AGTAATTGTTTATTGACAATTGTGAATTCACCAGCTAAAACACGACGACTGTAAATATTT 8047 Query 113951 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGC 114010 | |||||||| ||||| || ||||||||||| | |||||| || || || || ||| Sbjct 8046 GAAGTGTATGGTTCAAAACATTCATTGTTACCAAGGATTTGACTTGTTGAAGCGGTTGGC 7987 Query 114011 ATGGGTGCCATGAGAAGGCTGTTACGGAGAC--CCTTT-TCCCTAATGCGTTCCTTGAGG 114067 || ||||| || | || |||||| | || ||||| | || ||||| | Sbjct 7986 ATTGGTGCAATTAAGAGTGAGTTACGTAAACCACCTTTATTGACGATCTTATCCTTTAAT 7927 Query 114068 GC-GTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACC 114126 | |||| | || | ||| ||| || | | | |||||||||| | || |||||||| Sbjct 7926 TCTGTCCAATTCCAACGTGAACTTGGTGT-AACATTCCACATATCATATTGAAGGATACC 7868 Query 114127 TTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTC-GG 114185 || || ||||| || || | || | || || || || ||| | |||||||| | Sbjct 7867 TTTAGAAGCTGGTGAGCCTTGGAAAGATTCATAAGGACCATCACGAACGGCCAATTCATG 7808 Query 114186 AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGG 114245 || || | || ||| ||| || || ||| || | |||| | | |||| Sbjct 7807 AG-AGGCTGTTAAAGCAGCGAAATAAATGGTTTCAGCGATTTCAACATTTAAT---TTGG 7752 Query 114246 CCTCG---TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGA 114302 | || | ||| || | | || ||| || ||||| || | |||||| | Sbjct 7751 CAGCGGCAACACTATCGAAAGGCATACGCATTTTAATGAAAACATCTGCTAAACCTTGAA 7692 Query 114303 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGAT 114359 ||| | |||||||| |||||||| | ||| || || ||| ||| || |||| Sbjct 7691 TACCAATACCAATTGGACGATGTCTAAGATTTGAGGTTTTAGC---CTCGATAACTGGAT 7635 Query 114360 AAAAATTCCTATC---GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC-A 114415 || | || | ||| |||||| ||| |||||| |||| | || |||||||| | Sbjct 7634 AATAGTTACGATCAATGATAAC---ATTAAGATTTACTGTGATTAATTTGGTGATTTCAA 7578 Query 114416 TGAAGCTTT--TCGT--AATCAAAACT------------GCGAGTCTCTTCATTGAC--A 114457 || | || | || ||| ||||| || || | ||||| | Sbjct 7577 AGAGGAATTGATGGTCAAATTCAAACTCTTTTGGATTGGTTGAACCTGCTTTTTGACGAA 7518 Query 114458 T--ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA-GTG 114514 | | || ||||| ||||| || || |||||||| || | | |||| || | | || Sbjct 7517 TGAATTTTGGAAGTGCGATAGAGGCGAGATTACAAACGGCAATTTCAT-CTGGTGATGTA 7459 Query 114515 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 114574 || | || ||||| ||||| | ||| ||| ||||||| || || ||||||||||| Sbjct 7458 TATTGAATGATTTCTGTACAAAGATTACTACTACTAATGGTACCTAAATTCTTTTGATTG 7399 Query 114575 GACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGAC 114634 || || | || || |||||||| || | ||| |||| || || || || ||| || Sbjct 7398 GATTTGGCATTGCAAGCATCCTTATACAAGATGAATGGTGTACCAGTTTCAACTTGAGAT 7339 Query 114635 TTGAGAATAGCCTTCCAGACATCGGCGGCTGGCA-CAGTGGCGTTGGCTCGCCCCTCCT- 114692 | | ||| || ||| | ||| ||| | | | |||| ||| | Sbjct 7338 TCCATAATGGCGAACCAAAGATCTTGAGCTTTAATTATACGTCTTGGTAGGCCTGGTGTG 7279 Query 114693 -CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 114751 | || || || |||||| || | | |||| | || | || |||||| Sbjct 7278 GCTTCATATTTCAAGTAGAGAGCACGATGTTGTTCAGAGTGAGTTTCAGCAAGACCTGGT 7219 Query 114752 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGG 114811 || | | ||| || ||||||| ||| | |||| | || ||||||| ||| |||| Sbjct 7218 GCTTCGTTTGGACAAAAGAGAGCCCAATCACCATTTTGTTCGACACGCTCCATAAAGATA 7159 Query 114812 TCTGGGATCCAGAGAGCTGAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATT 114870 || || ||| || || |||| || || | | | | || || | || || || Sbjct 7158 TCACTGACCCAAAGGGCATAGAAAAGGTCTCTAGCTCTCATCTCCTCTTTACCAGTGTTT 7099 Query 114871 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 114930 | | || | || || | || ||| |||||||| || |||| ||| || || | Sbjct 7098 TTCTTG-AGATCAATGAATTCAAAGACATCGGCGTGCCATGGCTCCAAGTAAACGGCAAA 7040 Query 114931 TGACCCCTTAC---GACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCG 114987 | || || | | |||| | || | || || | || || |||| || || || Sbjct 7039 GGCACCTTTTCTCTTGCCACCACCTTGATCGACGTAACGAGCAGTATCATTGAAAACACG 6980 Query 114988 AAGCATTGGAATGATACCATCAGATTG-GCCATTTGTCCCCCGAATACGAGACTTATTGG 115046 ||||||||| | | ||||| | | | ||||| || || |||||| | | | | Sbjct 6979 AAGCATTGGTACCAAACCAT-TGCTAGTACCATTGGTACCACGAATATAACTTTGAGCAG 6921 Query 115047 CTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACT 115106 | | | | ||| | | ||||||||||| || || | ||||||||| | ||||| | Sbjct 6920 CACGAATTTTATGAACGGCAATACCAATACCACCAGCACTCTTTGAGATGAGTGCGCATT 6861 Query 115107 CCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTT-ATTTGCGATAAGGAAGCAG 115165 | | | ||||||| || ||||| || || | || ||||| ||| ||| || Sbjct 6860 GTTTCAAGGTATCGTAGATACCATCGATTGAATCCTCTTTCATTTGAACTAA-GAAACAA 6802 Query 115166 CTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA- 115224 ||||||||||| ||||||||| || ||||| | ||||||||| || || |||| Sbjct 6801 GAAGACATTTGTGGTGATGGTGTACCTGCATTGAATAAGGTTGGTGTGGCATGAGTGAAT 6742 Query 115225 CATACCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAAT 115284 || || | | | | | ||| || | | | | ||||||||| || || || Sbjct 6741 AATTTCTCTGATAAACGT-TTGTATGTGTTGATAGCAGAATCAATGTCTTCGCCATGGAT 6683 Query 115285 ACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 ||| || || || ||||| ||||||| ||| || Sbjct 6682 ACCAATTGAAACACGCATCAACATGTGTTGTGG 6650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597340368617760