Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq102 84.2 2e-11 >seq102 Length=41085 Score = 84.2 bits (92), Expect = 2e-11 Identities = 163/238 (68%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 41972 AATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATT 42031 |||||| ||| ||||| || | | ||||| || | ||| || ||||| || || Sbjct 853 AATTTAGTTACCACCTCTCAATCTGAGAACCAAGTGAAGAGTGGATTCTTTTTGGATGTT 794 Query 42032 GTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTG 42091 |||||||| ||||| || | || |||| || ||||||||||| ||||| || || || Sbjct 793 GTAATCAGAGAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATGAGACGTTGTTG 734 Query 42092 GTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCG-TGTCGC 42150 || | ||| | | || |||| | ||| | || | || | | | || | | || | Sbjct 733 ATCTGGTGGAATACCTTCTTTGT-CTTGAATCTTGGCTTTAACATTTTCAATGTTATCAC 675 Query 42151 TCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | ||| || || | |||||||| || || || || || || |||||||||||||| Sbjct 674 TACCTTCGACCTCTAAGGTGATGGTCTTTCCAGTGAGGGTTTTAACAAAGATTTGCAT 617 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||||||| | || || || || | ||| || ||||| ||||||||||||| Sbjct 388 ACCACCTCTTAATCTTAAAACTAAGTGAAGAGTGGATTCTTTTTGGATATTGTAATCAGA 329 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || |||| || ||||||||||| || | || || || || | ||| Sbjct 328 AAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGTGG 269 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCG-TGTCGCTCGATTCCA 42159 | | || |||| | ||| | || | || | | | || | | || || ||| | Sbjct 268 AATACCTTCTTTGT-CTTGAATCTTGGCTTTAACATTTTCAATGTTATCACTACCTTCGA 210 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || | ||||| || ||||| || || || || |||||||||||||| Sbjct 209 CCTCTAAGGTGATAGTCTTGCCAGTGAGAGTTTTAACAAAGATTTGCAT 161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543200767836480