Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq319 98.7 1e-15 >seq319 Length=25483 Score = 98.7 bits (108), Expect = 1e-15 Identities = 195/286 (68%), Gaps = 2/286 (1%) Strand=Plus/Plus Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 || || || ||||||||||| || ||| || | || || ||||| || || ||||| Sbjct 6932 TATATTCGTGGTACCAATGGTACTAGCAATGGTTTGGTACCAATGCTTCGTGTTTTCAAT 6991 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 | | || || ||||| || || |||||||| | ||| || ||| | || || || || Sbjct 6992 GATACTGCTCGTTACGTCGATCAAGGTGGTGGCAAGAGAAAAGGTGCCTTTGCCGTTTAC 7051 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCAC-GGCAA 94250 | ||||| |||||||| || || | ||||| || || | | | || ||| || || Sbjct 7052 TTGGAGCCATGGCACGCCGATGTCTTTGAATTCATTGATCT-CAAGAAAAACACTGGTAA 7110 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || | ||| || |||||||| ||||| || || ||||| || | |||||| | Sbjct 7111 AGAGGAGATGAGAGCTAGAGACCTTTTCTATGCCCTTTGGGTCAGTGATATCTTTATGGA 7170 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356 || ||||| |||| | ||| ||| |||||||| || ||| Sbjct 7171 GCGTGTCGAACAAAATGGTGATTGGGCTCTCTTTTGTCCAAACGAA 7216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494712241881120