Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20citrinum_20[genbank_20GCA_5F000286055.1_202012-11- 01] 1,772 sequences; 26,251,846 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq90 107 2e-18 seq1199 89.7 5e-13 seq641 89.7 5e-13 >seq90 Length=44396 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 |||||||| || | | |||| |||||||| ||||| || ||| | |||||| || Sbjct 14417 AAAACTAAGTGGAGGGTTGATTCCTTTTGGATGTTATAATCGGATAAAGTACGACCATCT 14358 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||||||||||| | |||| ||||| ||||| || || || |||||||||||||| Sbjct 14357 TCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTGTC- 14299 Query 138523 GTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| | || | ||| | | ||| | | |||| | || || |||| || | || Sbjct 14298 TTGAATCTTGGCTTTGACGTTTTCGATGTTGTCTGAACCTTCAACTTCGAGAGTGATGGT 14239 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||| | ||||| || || || ||||| Sbjct 14238 TTTACCAGTTAAGGTTTTAACGAAGATTTGCAT 14206 >seq1199 Length=11192 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||||||||| | | || || ||||| || ||||| || | |||||| || Sbjct 1194 AAAACTAAATGGAGTGTGGATTCTTTTTGGATATTGTAATCTGATAAAGTACGACCATCT 1253 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||||||||| | | || ||||| |||||||| || || ||||||||||| || Sbjct 1254 TCTAATTGTTTACCAGCGAAAATGAGACGTTGTTGGTCTGGTGGGATACCTTCTTTATC- 1312 Query 138523 GTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| |||| | ||||| | ||| | | | || | || || || | || | || Sbjct 1313 TTGAATTTTGGCTTTAACATTTTCAATGTTATCTGAACCTTCAACTTCCAATGTGATGGT 1372 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||| | ||||| |||||||| ||||| Sbjct 1373 TTTACCAGTTAATGTTTTAACAAAAATTTGCAT 1405 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||||||||| | | || || ||||| || ||||| || | |||||| || Sbjct 738 AAAACTAAATGGAGTGTGGATTCTTTTTGGATATTGTAATCTGATAAAGTACGACCATCT 797 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||||||||| | | | |||| | ||||| || || || ||||||||||| || Sbjct 798 TCTAATTGTTTACCTGCAAAAATTAATCTTTGTTGATCTGGTGGGATACCTTCTTTATCT 857 Query 138523 GTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 |||||| ||| | | ||| | | | || | || || || | || | ||| Sbjct 858 TGGATTTTGGCTTTGACATTTTCAATGTTATCTGAACCTTCGACTTCTAATGTGATGGTT 917 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||||||| |||||||||||||| || |||||| Sbjct 918 TTACCAGTGAGAGTTTTTACAAAGATTTGCATG 950 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || ||||| |||||||| || | |||||| || || | ||||||||| | Sbjct 984 GATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTGTTTACCAGCG 1043 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || ||||| |||||||| || || ||||||||||| || ||| |||| | ||||| Sbjct 1044 AAAATGAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATC-TTGAATTTTGGCTTTAAC 1102 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | ||| | | | || | || || || | || | ||||||||||| |||||||| Sbjct 1103 ATTTTCAATGTTATCTGAACCTTCGACTTCTAATGTGATGGTTTTACCAGTGAGAGTTTT 1162 Query 138600 TACAAAAATCTGCAT 138614 ||||| || ||||| Sbjct 1163 AACAAAGATTTGCAT 1177 >seq641 Length=13309 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 || ||||| | |||| || ||||| || || || || | |||||| || || Sbjct 12990 ACCAAATGGAGAGTTGATTCTTTTTGGATATTATAATCAGAGAGAGTACGGCCATCTTCC 13049 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||| | | || ||||| ||||| || ||||| ||||||||||| || | Sbjct 13050 AATTGTTTACCTGCGAAAATGAGACGTTGTTGATCTGGAGGAATACCTTCTTTATCTTGG 13109 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 ||||| |||| | ||| | | |||| | || || |||| || | |||||| Sbjct 13110 ATTTTAGCCTTTACATTTTCGATGTTGTCACTACCTTCAACTTCGAGTGTAATGGTTTTA 13169 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || ||||| |||||||| ||||| Sbjct 13170 CCAGTGAGGGTTTTAACAAAAATTTGCAT 13198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496251407787840